Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 7SK.13-201ENST00000622040 250 ntBASIC3.44□□□□□ -1.86
NPM3O75607 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.44□□□□□ -1.86
NPM3O75607 MIR520F-201ENST00000384824 87 ntBASIC3.43□□□□□ -1.86
NPM3O75607 MIR9-1-201ENST00000385198 89 ntBASIC3.43□□□□□ -1.86
NPM3O75607 SNORA75.1-201ENST00000391130 148 ntBASIC3.43□□□□□ -1.86
NPM3O75607 RNU7-21P-201ENST00000459430 62 ntBASIC3.43□□□□□ -1.86
NPM3O75607 RNU6-135P-201ENST00000516769 101 ntBASIC3.43□□□□□ -1.86
NPM3O75607 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
NPM3O75607 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPM3O75607 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NPM3O75607 SNORA80D-201ENST00000384488 135 ntBASIC3.42□□□□□ -1.86
NPM3O75607 MIR548C-201ENST00000384815 97 ntBASIC3.42□□□□□ -1.86
NPM3O75607 SNORD113-2-201ENST00000391082 72 ntBASIC3.42□□□□□ -1.86
NPM3O75607 AC087499.2-201ENST00000432861 149 ntBASIC3.42□□□□□ -1.86
NPM3O75607 RNU7-90P-201ENST00000459216 62 ntBASIC3.42□□□□□ -1.86
NPM3O75607 AC025033.1-201ENST00000463883 194 ntBASIC3.42□□□□□ -1.86
NPM3O75607 MIR4319-201ENST00000577285 85 ntBASIC3.42□□□□□ -1.86
NPM3O75607 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPM3O75607 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPM3O75607 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPM3O75607 RN7SL633P-201ENST00000488974 297 ntBASIC3.41□□□□□ -1.86
NPM3O75607 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPM3O75607 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPM3O75607 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPM3O75607 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPM3O75607 RNU6-990P-201ENST00000364385 104 ntBASIC3.4□□□□□ -1.87
NPM3O75607 RNU6-520P-201ENST00000384717 104 ntBASIC3.4□□□□□ -1.87
NPM3O75607 AC079600.2-201ENST00000550076 130 ntBASIC3.4□□□□□ -1.87
NPM3O75607 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NPM3O75607 SNORA46-201ENST00000384762 135 ntBASIC3.39□□□□□ -1.87
NPM3O75607 MT-TY-201ENST00000387409 66 ntBASIC3.39□□□□□ -1.87
NPM3O75607 MIR4460-201ENST00000577862 86 ntBASIC3.39□□□□□ -1.87
NPM3O75607 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPM3O75607 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NPM3O75607 Y_RNA.379-201ENST00000365653 102 ntBASIC3.38□□□□□ -1.87
NPM3O75607 MIR630-201ENST00000384957 97 ntBASIC3.38□□□□□ -1.87
NPM3O75607 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NPM3O75607 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPM3O75607 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
NPM3O75607 MIR521-2-201ENST00000384818 87 ntBASIC3.37□□□□□ -1.87
NPM3O75607 Z98941.1-201ENST00000407764 100 ntBASIC3.37□□□□□ -1.87
NPM3O75607 RNA5SP21-201ENST00000410917 96 ntBASIC3.37□□□□□ -1.87
NPM3O75607 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC3.37□□□□□ -1.87
NPM3O75607 SNORA40.17-201ENST00000517256 115 ntBASIC3.37□□□□□ -1.87
NPM3O75607 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPM3O75607 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPM3O75607 Y_RNA.363-201ENST00000365529 113 ntBASIC3.36□□□□□ -1.87
NPM3O75607 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.36□□□□□ -1.87
NPM3O75607 AL157398.1-201ENST00000452981 186 ntBASIC3.36□□□□□ -1.87
NPM3O75607 RNU6-902P-201ENST00000517212 91 ntBASIC3.36□□□□□ -1.87
NPM3O75607 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.36□□□□□ -1.87
NPM3O75607 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPM3O75607 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NPM3O75607 MIR934-201ENST00000401241 83 ntBASIC3.35□□□□□ -1.87
NPM3O75607 AL138827.1-201ENST00000402666 306 ntBASIC3.35□□□□□ -1.87
NPM3O75607 RNA5SP293-201ENST00000410527 113 ntBASIC3.35□□□□□ -1.87
NPM3O75607 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NPM3O75607 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPM3O75607 MIR449A-201ENST00000362113 91 ntBASIC3.34□□□□□ -1.87
NPM3O75607 RNU6-1312P-201ENST00000362425 108 ntBASIC3.34□□□□□ -1.87
NPM3O75607 MIR517B-201ENST00000385102 67 ntBASIC3.34□□□□□ -1.87
NPM3O75607 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
NPM3O75607 AL136317.1-201ENST00000612653 226 ntBASIC3.34□□□□□ -1.87
NPM3O75607 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPM3O75607 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
NPM3O75607 MIR548L-201ENST00000408303 86 ntBASIC3.33□□□□□ -1.88
NPM3O75607 RNU4-88P-201ENST00000411220 86 ntBASIC3.33□□□□□ -1.88
NPM3O75607 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.33□□□□□ -1.88
NPM3O75607 UQCRHP3-201ENST00000451503 251 ntBASIC3.33□□□□□ -1.88
NPM3O75607 SNORD109B-201ENST00000458961 67 ntBASIC3.33□□□□□ -1.88
NPM3O75607 SNORD109A-201ENST00000459128 67 ntBASIC3.33□□□□□ -1.88
NPM3O75607 MIR3198-2-201ENST00000577868 80 ntBASIC3.33□□□□□ -1.88
NPM3O75607 uc_338.10-201ENST00000621872 182 ntBASIC3.33□□□□□ -1.88
NPM3O75607 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPM3O75607 SNORD41.1-201ENST00000391000 69 ntBASIC3.32□□□□□ -1.88
NPM3O75607 RNU4ATAC4P-201ENST00000516307 126 ntBASIC3.32□□□□□ -1.88
NPM3O75607 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.32□□□□□ -1.88
NPM3O75607 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NPM3O75607 RNU6-698P-201ENST00000363523 107 ntBASIC3.31□□□□□ -1.88
NPM3O75607 RNU1-112P-201ENST00000364401 164 ntBASIC3.31□□□□□ -1.88
NPM3O75607 RNU6-34P-201ENST00000364874 107 ntBASIC3.31□□□□□ -1.88
NPM3O75607 MIR512-1-201ENST00000384913 84 ntBASIC3.31□□□□□ -1.88
NPM3O75607 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
NPM3O75607 MIR4639-201ENST00000584938 69 ntBASIC3.31□□□□□ -1.88
NPM3O75607 MIR7153-201ENST00000637758 57 ntBASIC3.31□□□□□ -1.88
NPM3O75607 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPM3O75607 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPM3O75607 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
NPM3O75607 RNU6-859P-201ENST00000362728 107 ntBASIC3.3□□□□□ -1.88
NPM3O75607 RN7SL429P-201ENST00000479090 223 ntBASIC3.3□□□□□ -1.88
NPM3O75607 RN7SL489P-201ENST00000486185 223 ntBASIC3.3□□□□□ -1.88
NPM3O75607 RN7SL327P-201ENST00000488659 223 ntBASIC3.3□□□□□ -1.88
NPM3O75607 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.3□□□□□ -1.88
NPM3O75607 RNU6-469P-201ENST00000516253 101 ntBASIC3.3□□□□□ -1.88
NPM3O75607 RN7SL853P-201ENST00000617250 223 ntBASIC3.3□□□□□ -1.88
NPM3O75607 U8.9-201ENST00000365667 134 ntBASIC3.29□□□□□ -1.88
NPM3O75607 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NPM3O75607 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NPM3O75607 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
NPM3O75607 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 290.5 ms