Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SNORD30.1-201ENST00000391309 70 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 AC015818.7-201ENST00000428754 109 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 RNU6-531P-201ENST00000516694 104 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 SNORA25.16-201ENST00000516741 121 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 RNU11-2P-201ENST00000516898 142 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 RNU6-303P-201ENST00000517091 106 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 AP003716.2-201ENST00000528260 108 ntBASIC2.16□□□□□ -2.06
PTCD1O75127 Y_RNA.12-201ENST00000362393 112 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 RNU5F-1-201ENST00000362507 117 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 RNU6-807P-201ENST00000516805 107 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 RNU6-165P-201ENST00000517170 99 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 AL512310.8-201ENST00000550183 120 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 U6.111-201ENST00000636093 83 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 ZNF209P-201ENST00000593450 2304 ntBASIC2.15□□□□□ -2.07
PTCD1O75127 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
PTCD1O75127 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PTCD1O75127 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PTCD1O75127 RNU6-243P-201ENST00000391140 107 ntBASIC2.14□□□□□ -2.07
PTCD1O75127 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
PTCD1O75127 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
PTCD1O75127 MIR7111-201ENST00000619751 72 ntBASIC2.14□□□□□ -2.07
PTCD1O75127 MIR1297-201ENST00000637311 77 ntBASIC2.14□□□□□ -2.07
PTCD1O75127 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.13□□□□□ -2.07
PTCD1O75127 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PTCD1O75127 RNU1-42P-201ENST00000364033 160 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 MIR518E-201ENST00000385252 88 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PTCD1O75127 SNORD63B-201ENST00000411005 70 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 SNORD92-201ENST00000585078 85 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 BX248123.2-201ENST00000606318 124 ntBASIC2.13□□□□□ -2.07
PTCD1O75127 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PTCD1O75127 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PTCD1O75127 MIR9-2-201ENST00000384838 87 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 Y_RNA.588-201ENST00000391254 102 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 RN7SKP88-201ENST00000516847 250 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 RNU7-156P-201ENST00000517214 74 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 7SK.8-201ENST00000612110 250 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 7SK.11-201ENST00000615477 250 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 7SK.13-201ENST00000622040 250 ntBASIC2.12□□□□□ -2.07
PTCD1O75127 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PTCD1O75127 RNU6-154P-201ENST00000384306 106 ntBASIC2.11□□□□□ -2.07
PTCD1O75127 RNU6-466P-201ENST00000391224 103 ntBASIC2.11□□□□□ -2.07
PTCD1O75127 RNU2-59P-201ENST00000410482 191 ntBASIC2.11□□□□□ -2.07
PTCD1O75127 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.11□□□□□ -2.07
PTCD1O75127 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.11□□□□□ -2.07
PTCD1O75127 MIR4491-201ENST00000581087 68 ntBASIC2.11□□□□□ -2.07
PTCD1O75127 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.1□□□□□ -2.07
PTCD1O75127 MIR377-201ENST00000362145 69 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 Y_RNA.330-201ENST00000365230 109 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 MIR548U-201ENST00000390728 81 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 RNU6-663P-201ENST00000391105 106 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 TRAJ51-201ENST00000504127 63 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 AC008834.1-201ENST00000511612 175 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 SNORD53B-201ENST00000577887 78 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 MIR3140-201ENST00000583685 90 ntBASIC2.1□□□□□ -2.07
PTCD1O75127 Y_RNA.36-201ENST00000362602 112 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 Y_RNA.264-201ENST00000364665 102 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 MT-TF-201ENST00000387314 71 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 RNU1-78P-201ENST00000391248 165 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 RPS27P16-201ENST00000425758 201 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 RNU7-195P-201ENST00000458793 62 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 AC048334.1-201ENST00000477975 159 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 RNU6-1194P-201ENST00000516208 104 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 YWHAEP2-201ENST00000580066 112 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 MIR4422-201ENST00000581938 83 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 YWHAEP3-201ENST00000582767 121 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 AC005520.4-201ENST00000604337 90 ntBASIC2.09□□□□□ -2.07
PTCD1O75127 RNU6-1051P-201ENST00000365471 102 ntBASIC2.08□□□□□ -2.08
PTCD1O75127 MIR154-201ENST00000385243 84 ntBASIC2.08□□□□□ -2.08
PTCD1O75127 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCD1O75127 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCD1O75127 Y_RNA.207-201ENST00000364142 106 ntBASIC2.07□□□□□ -2.08
PTCD1O75127 Y_RNA.371-201ENST00000365591 113 ntBASIC2.07□□□□□ -2.08
PTCD1O75127 SNORA8.1-201ENST00000384250 140 ntBASIC2.07□□□□□ -2.08
PTCD1O75127 RNU6-291P-201ENST00000384720 107 ntBASIC2.07□□□□□ -2.08
PTCD1O75127 MIR499A-201ENST00000384903 122 ntBASIC2.07□□□□□ -2.08
PTCD1O75127 MIR942-201ENST00000401111 86 ntBASIC2.07□□□□□ -2.08
PTCD1O75127 RNU6-471P-201ENST00000383944 106 ntBASIC2.06□□□□□ -2.08
PTCD1O75127 SNORD100-201ENST00000408573 76 ntBASIC2.06□□□□□ -2.08
PTCD1O75127 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
PTCD1O75127 U6.100-201ENST00000636230 99 ntBASIC2.06□□□□□ -2.08
PTCD1O75127 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PTCD1O75127 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PTCD1O75127 MIR1323-201ENST00000408090 73 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 SNORD93-201ENST00000408813 74 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 snoU13.21-201ENST00000459368 105 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 SNORA31.2-201ENST00000516019 134 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 TRDV1-202ENST00000621643 102 ntBASIC2.05□□□□□ -2.08
PTCD1O75127 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.05□□□□□ -2.08
PTCD1O75127 Y_RNA.42-201ENST00000362660 108 ntBASIC2.04□□□□□ -2.08
PTCD1O75127 RNU6-340P-201ENST00000364005 107 ntBASIC2.04□□□□□ -2.08
PTCD1O75127 Y_RNA.327-201ENST00000365201 102 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms