Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 Y_RNA.377-201ENST00000365644 108 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 SNORA80D-201ENST00000384488 135 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 RNU6-887P-201ENST00000410660 100 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 RNU7-56P-201ENST00000458744 62 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 Y_RNA.694-201ENST00000516677 117 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 Y_RNA.705-201ENST00000516862 110 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 AC023827.1-201ENST00000569247 97 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 MIR4771-2-201ENST00000577758 74 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 MIR4771-1-201ENST00000582617 74 ntBASIC0.83□□□□□ -2.28
CACNA1FO60840 MIR101-2-201ENST00000362195 79 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 RNY1P2-201ENST00000364820 117 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 Y_RNA.369-201ENST00000365568 117 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 MIR635-201ENST00000384830 98 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 RNU6-994P-201ENST00000410507 111 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 RNU6-109P-201ENST00000516364 107 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 RNU6-184P-201ENST00000516514 107 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 AL513043.2-201ENST00000573941 143 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 MIR1273G-201ENST00000577677 100 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 U7.3-201ENST00000616123 62 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 AP001362.1-201ENST00000625165 124 ntBASIC0.82□□□□□ -2.28
CACNA1FO60840 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 Y_RNA.95-201ENST00000363079 95 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 RNU6-49P-201ENST00000384256 107 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 RNY1P7-201ENST00000384743 110 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR34C-201ENST00000384831 77 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR516A2-201ENST00000384888 90 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR516A1-201ENST00000385033 90 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR216A-201ENST00000385063 110 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 RNU6-158P-201ENST00000517104 100 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 Y_RNA.290-201ENST00000364879 114 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR588-201ENST00000384900 83 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR520H-201ENST00000385126 88 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 RNU6-531P-201ENST00000516694 104 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 MIR4439-201ENST00000583746 80 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
CACNA1FO60840 SNORD83.1-201ENST00000411362 77 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 SNORA25.16-201ENST00000516741 121 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 Y_RNA.697-201ENST00000516776 113 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 RNU7-156P-201ENST00000517214 74 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 RNU6-86P-201ENST00000606534 107 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.8□□□□□ -2.28
CACNA1FO60840 MIR4679-1-201ENST00000637619 75 ntBASIC0.8□□□□□ -2.28
CACNA1FO60840 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CACNA1FO60840 SNORA72.6-201ENST00000384520 129 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 AC109327.2-201ENST00000448339 378 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 AC012531.4-201ENST00000616509 177 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
CACNA1FO60840 RNA5SP457-201ENST00000363657 124 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 SNORD116-22-201ENST00000384430 92 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 MIR548G-201ENST00000408442 89 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 AC015818.7-201ENST00000428754 109 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 AC087499.7-201ENST00000441958 109 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 SNORD92-201ENST00000585078 85 ntBASIC0.79□□□□□ -2.28
CACNA1FO60840 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CACNA1FO60840 SNORD36A-201ENST00000362874 73 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 Y_RNA.558-201ENST00000384685 113 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 RNU6-644P-201ENST00000391155 98 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 Y_RNA.588-201ENST00000391254 102 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 AC092628.1-201ENST00000436250 252 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 TRAJ51-201ENST00000504127 63 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 RNU6-162P-201ENST00000516228 103 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 AC019288.1-201ENST00000557918 224 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 MALAT1.1-201ENST00000618249 95 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 AC025521.1-201ENST00000621624 286 ntBASIC0.78□□□□□ -2.28
CACNA1FO60840 Y_RNA.57-201ENST00000362806 113 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 RNA5SP499-201ENST00000363982 119 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 Y_RNA.342-201ENST00000365352 113 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 MIR200A-201ENST00000384875 90 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 MIR450A2-201ENST00000385022 100 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 SPINT5P-201ENST00000448174 155 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 AC243829.6-201ENST00000612652 106 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.77□□□□□ -2.29
CACNA1FO60840 RNU6-1125P-201ENST00000363601 107 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 RNU6-480P-201ENST00000384332 107 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 Y_RNA.536-201ENST00000384621 113 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 RNU6-243P-201ENST00000391140 107 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 RNU6-1254P-201ENST00000391266 104 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 RNU6-850P-201ENST00000516934 103 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 MIR924-201ENST00000638017 53 ntBASIC0.77□□□□□ -2.29
CACNA1FO60840 Y_RNA.119-201ENST00000363301 96 ntBASIC0.76□□□□□ -2.29
CACNA1FO60840 RNA5SP62-201ENST00000363457 110 ntBASIC0.76□□□□□ -2.29
CACNA1FO60840 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
CACNA1FO60840 RNU1-119P-201ENST00000391122 165 ntBASIC0.76□□□□□ -2.29
CACNA1FO60840 RNA5SP476-201ENST00000516613 103 ntBASIC0.76□□□□□ -2.29
CACNA1FO60840 MIR1-1-201ENST00000362147 71 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms