Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNORD4B-201ENST00000459083 72 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 MIR548BB-201ENST00000626714 66 ntBASIC1.38□□□□□ -2.19
NPHS1O60500 RNU6-979P-201ENST00000383896 107 ntBASIC1.37□□□□□ -2.19
NPHS1O60500 MIR764-201ENST00000390811 85 ntBASIC1.37□□□□□ -2.19
NPHS1O60500 MIR1827-201ENST00000408549 66 ntBASIC1.37□□□□□ -2.19
NPHS1O60500 AC067940.1-201ENST00000458411 300 ntBASIC1.37□□□□□ -2.19
NPHS1O60500 RNU6-448P-201ENST00000517052 107 ntBASIC1.37□□□□□ -2.19
NPHS1O60500 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
NPHS1O60500 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.37□□□□□ -2.19
NPHS1O60500 RNU6-291P-201ENST00000384720 107 ntBASIC1.36□□□□□ -2.19
NPHS1O60500 MIR520F-201ENST00000384824 87 ntBASIC1.36□□□□□ -2.19
NPHS1O60500 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
NPHS1O60500 RNU7-10P-201ENST00000607194 63 ntBASIC1.36□□□□□ -2.19
NPHS1O60500 RNA5SP245-201ENST00000364239 121 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 RNU6-1276P-201ENST00000365372 104 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 RNU6-242P-201ENST00000384359 107 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 RNU6-535P-201ENST00000384722 107 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 RNU6-482P-201ENST00000391068 107 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 RNU1-119P-201ENST00000391122 165 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
NPHS1O60500 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.35□□□□□ -2.19
NPHS1O60500 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 MIR519A1-201ENST00000385257 85 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 Y_RNA.809-201ENST00000516058 95 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 AC006160.2-201ENST00000637708 154 ntBASIC1.34□□□□□ -2.19
NPHS1O60500 RNU4-32P-201ENST00000363404 141 ntBASIC1.33□□□□□ -2.2
NPHS1O60500 RNU6-957P-201ENST00000363652 99 ntBASIC1.33□□□□□ -2.2
NPHS1O60500 Y_RNA.283-201ENST00000364798 112 ntBASIC1.33□□□□□ -2.2
NPHS1O60500 MIR519C-201ENST00000385053 87 ntBASIC1.33□□□□□ -2.2
NPHS1O60500 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
NPHS1O60500 RMST_2.1-201ENST00000617263 136 ntBASIC1.33□□□□□ -2.2
NPHS1O60500 RNA5SP432-201ENST00000362480 116 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 RNU6-524P-201ENST00000384270 107 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 SNORD89-201ENST00000390981 114 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 RNU6-466P-201ENST00000391224 103 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 RNU6-75P-201ENST00000515944 104 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 RNU6-237P-201ENST00000515985 71 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 AP003327.1-201ENST00000529684 127 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 MIR4536-1-201ENST00000583537 88 ntBASIC1.32□□□□□ -2.2
NPHS1O60500 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.32□□□□□ -2.2
NPHS1O60500 RNU1-17P-201ENST00000363022 152 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 Y_RNA.219-201ENST00000364232 113 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 SNORD124-201ENST00000459577 104 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 RNU7-171P-201ENST00000459581 62 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 RNU6-65P-201ENST00000516332 98 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 AC138907.6-201ENST00000568401 126 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 AC138869.1-201ENST00000568623 124 ntBASIC1.31□□□□□ -2.2
NPHS1O60500 RNU6-1260P-201ENST00000362944 107 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 Y_RNA.426-201ENST00000384068 113 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 MIR19B1-201ENST00000384829 87 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 MIR520H-201ENST00000385126 88 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 AL606490.4-201ENST00000423117 127 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 RNU7-153P-201ENST00000516455 62 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
NPHS1O60500 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NPHS1O60500 RNU6-787P-201ENST00000384032 107 ntBASIC1.29□□□□□ -2.2
NPHS1O60500 MIR599-201ENST00000385069 95 ntBASIC1.29□□□□□ -2.2
NPHS1O60500 SNORD78.1-201ENST00000390866 65 ntBASIC1.29□□□□□ -2.2
NPHS1O60500 AC097635.1-201ENST00000450678 155 ntBASIC1.29□□□□□ -2.2
NPHS1O60500 AL359821.1-201ENST00000605519 182 ntBASIC1.29□□□□□ -2.2
NPHS1O60500 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
NPHS1O60500 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
NPHS1O60500 RNU6-228P-201ENST00000362700 106 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 RNU6-132P-201ENST00000383863 107 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 RNU6-1124P-201ENST00000384169 107 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 MIR1236-201ENST00000408340 102 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 RNU6-1110P-201ENST00000516462 101 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 TRDV1-202ENST00000621643 102 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 uc_338.16-201ENST00000621804 95 ntBASIC1.28□□□□□ -2.2
NPHS1O60500 Y_RNA.32-201ENST00000362589 110 ntBASIC1.27□□□□□ -2.21
NPHS1O60500 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
NPHS1O60500 MIR942-201ENST00000401111 86 ntBASIC1.27□□□□□ -2.21
NPHS1O60500 FABP5P4-201ENST00000437203 171 ntBASIC1.27□□□□□ -2.21
NPHS1O60500 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
NPHS1O60500 AC093729.1-201ENST00000513074 128 ntBASIC1.27□□□□□ -2.21
NPHS1O60500 SNORA31.14-201ENST00000516728 116 ntBASIC1.27□□□□□ -2.21
NPHS1O60500 MIRLET7F1-201ENST00000362202 87 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 RNU6-811P-201ENST00000384069 107 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 Y_RNA.437-201ENST00000384113 113 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 Y_RNA.508-201ENST00000384502 114 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 RNA5SP292-201ENST00000390974 118 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 RNA5SP404-201ENST00000517118 132 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 MIR4666B-201ENST00000578142 81 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 AL136317.1-201ENST00000612653 226 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 MIR3202-2-201ENST00000635980 79 ntBASIC1.26□□□□□ -2.21
NPHS1O60500 SNORD115-37-201ENST00000363768 82 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 Y_RNA.221-201ENST00000364248 96 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 Y_RNA.313-201ENST00000365095 103 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 SNORD105-201ENST00000386910 85 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 RNU6-1275P-201ENST00000391087 107 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 Y_RNA.607-201ENST00000410597 98 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 AC244505.6-201ENST00000452829 130 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 U7.7-201ENST00000459276 60 ntBASIC1.25□□□□□ -2.21
NPHS1O60500 MIR4303-201ENST00000581299 66 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 285.7 ms