Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR3671-201ENST00000580455 88 ntBASIC0.06□□□□□ -2.4
SNX3O60493 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
SNX3O60493 AC025166.1-201ENST00000612411 163 ntBASIC0.06□□□□□ -2.4
SNX3O60493 Y_RNA.35-201ENST00000362601 101 ntBASIC0.05□□□□□ -2.4
SNX3O60493 RNU6-1260P-201ENST00000362944 107 ntBASIC0.05□□□□□ -2.4
SNX3O60493 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
SNX3O60493 Y_RNA.342-201ENST00000365352 113 ntBASIC0.05□□□□□ -2.4
SNX3O60493 Y_RNA.343-201ENST00000365354 112 ntBASIC0.05□□□□□ -2.4
SNX3O60493 MIR643-201ENST00000385267 97 ntBASIC0.05□□□□□ -2.4
SNX3O60493 MTND5P40-201ENST00000559945 246 ntBASIC0.05□□□□□ -2.4
SNX3O60493 RNU6-363P-201ENST00000362895 105 ntBASIC0.04□□□□□ -2.4
SNX3O60493 Y_RNA.344-201ENST00000365381 112 ntBASIC0.04□□□□□ -2.4
SNX3O60493 RNU6-524P-201ENST00000384270 107 ntBASIC0.04□□□□□ -2.4
SNX3O60493 Y_RNA.506-201ENST00000384494 102 ntBASIC0.04□□□□□ -2.4
SNX3O60493 Y_RNA.568-201ENST00000384742 113 ntBASIC0.04□□□□□ -2.4
SNX3O60493 MIR516A2-201ENST00000384888 90 ntBASIC0.04□□□□□ -2.4
SNX3O60493 MIR516A1-201ENST00000385033 90 ntBASIC0.04□□□□□ -2.4
SNX3O60493 SNORA40-201ENST00000388090 126 ntBASIC0.04□□□□□ -2.4
SNX3O60493 RNU6-257P-201ENST00000410238 98 ntBASIC0.04□□□□□ -2.4
SNX3O60493 SNORA62.5-201ENST00000516634 120 ntBASIC0.04□□□□□ -2.4
SNX3O60493 MIR6515-201ENST00000619843 57 ntBASIC0.04□□□□□ -2.4
SNX3O60493 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.04□□□□□ -2.4
SNX3O60493 AL512310.12-203ENST00000640543 90 ntBASIC0.04□□□□□ -2.4
SNX3O60493 MTND5P18-201ENST00000445624 1801 ntBASIC0.03□□□□□ -2.4
SNX3O60493 Y_RNA.323-201ENST00000365157 109 ntBASIC0.03□□□□□ -2.4
SNX3O60493 RNU6-1265P-201ENST00000516342 103 ntBASIC0.03□□□□□ -2.4
SNX3O60493 RNU6-1006P-201ENST00000516998 103 ntBASIC0.03□□□□□ -2.4
SNX3O60493 MIR3920-201ENST00000581751 86 ntBASIC0.03□□□□□ -2.4
SNX3O60493 AC010487.4-201ENST00000637027 61 ntBASIC0.03□□□□□ -2.4
SNX3O60493 RNU6-1313P-201ENST00000362622 102 ntBASIC0.02□□□□□ -2.41
SNX3O60493 RNY4P6-201ENST00000363667 96 ntBASIC0.02□□□□□ -2.41
SNX3O60493 RNY1P5-201ENST00000383890 115 ntBASIC0.02□□□□□ -2.41
SNX3O60493 MIR501-201ENST00000390204 84 ntBASIC0.02□□□□□ -2.41
SNX3O60493 AL353813.1-201ENST00000440700 253 ntBASIC0.02□□□□□ -2.41
SNX3O60493 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
SNX3O60493 AC073869.9-201ENST00000641610 120 ntBASIC0.02□□□□□ -2.41
SNX3O60493 Y_RNA.630-201ENST00000411370 108 ntBASIC0.01□□□□□ -2.41
SNX3O60493 RNU7-13P-201ENST00000516413 62 ntBASIC0.01□□□□□ -2.41
SNX3O60493 uc_338.28-201ENST00000612082 187 ntBASIC0.01□□□□□ -2.41
SNX3O60493 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.01□□□□□ -2.41
SNX3O60493 Y_RNA.155-201ENST00000363632 101 ntBASIC0□□□□□ -2.41
SNX3O60493 RNA5SP325-201ENST00000363756 130 ntBASIC0□□□□□ -2.41
SNX3O60493 Y_RNA.247-201ENST00000364500 92 ntBASIC0□□□□□ -2.41
SNX3O60493 RNU6-409P-201ENST00000384114 104 ntBASIC0□□□□□ -2.41
SNX3O60493 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
SNX3O60493 SPINT5P-201ENST00000448174 155 ntBASIC0□□□□□ -2.41
SNX3O60493 RNU6-1211P-201ENST00000459179 105 ntBASIC0□□□□□ -2.41
SNX3O60493 RNU6-772P-201ENST00000516042 105 ntBASIC0□□□□□ -2.41
SNX3O60493 MIR4514-201ENST00000581410 57 ntBASIC0□□□□□ -2.41
SNX3O60493 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
SNX3O60493 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0□□□□□ -2.41
SNX3O60493 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
SNX3O60493 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.01□□□□□ -2.41
SNX3O60493 MIR598-201ENST00000384868 97 ntBASIC-0.01□□□□□ -2.41
SNX3O60493 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.01□□□□□ -2.41
SNX3O60493 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
SNX3O60493 AC023932.2-201ENST00000603176 175 ntBASIC-0.01□□□□□ -2.41
SNX3O60493 SNORD38.1-201ENST00000363863 68 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 MIR548H2-201ENST00000408874 88 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 RNA5SP484-201ENST00000458857 111 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 MIR548AD-201ENST00000584780 82 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 RNU6-90P-201ENST00000606352 106 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 U7.6-201ENST00000610841 64 ntBASIC-0.02□□□□□ -2.41
SNX3O60493 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 RNU6-509P-201ENST00000363519 107 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 MIR593-201ENST00000384856 100 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 MIR145-201ENST00000384967 88 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 RNU6-816P-201ENST00000390914 107 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 MIR548G-201ENST00000408442 89 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 AC006210.1-201ENST00000424882 111 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.03□□□□□ -2.41
SNX3O60493 RNU6-971P-201ENST00000516920 106 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 NAMPTP3-201ENST00000569273 224 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
SNX3O60493 AL157777.2-201ENST00000258070 137 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 MIR539-201ENST00000365690 78 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 SNORD110-201ENST00000408189 75 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 RNU7-107P-201ENST00000459121 61 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 snoU13.18-201ENST00000459483 104 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 MIR3668-201ENST00000582138 75 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 AL162726.3-218ENST00000636401 95 ntBASIC-0.04□□□□□ -2.42
SNX3O60493 SNORD36A-201ENST00000362874 73 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 RNU6-652P-201ENST00000365488 107 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 RNU6-209P-201ENST00000384118 107 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 RNU6-907P-201ENST00000390924 102 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 MIR548I1-201ENST00000408810 149 ntBASIC-0.05□□□□□ -2.42
SNX3O60493 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.05□□□□□ -2.42
SNX3O60493 RNU7-74P-201ENST00000459104 62 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms