Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU6-907P-201ENST00000390924 102 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 RNA5SP63-201ENST00000391225 112 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 MIR548I1-201ENST00000408810 149 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 RNU6-257P-201ENST00000410238 98 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 AC097635.1-201ENST00000450678 155 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 RNU6-1234P-201ENST00000516877 103 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 RNU7-161P-201ENST00000517289 62 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
XRCC3O43542 SNORD58C-201ENST00000365223 64 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 RNU6-815P-201ENST00000384080 113 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 MIR599-201ENST00000385069 95 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 AC025166.1-201ENST00000612411 163 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 MIR2909-201ENST00000617113 69 ntBASIC0.21□□□□□ -2.38
XRCC3O43542 RNY4P6-201ENST00000363667 96 ntBASIC0.2□□□□□ -2.38
XRCC3O43542 RNU6-346P-201ENST00000516288 111 ntBASIC0.2□□□□□ -2.38
XRCC3O43542 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
XRCC3O43542 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
XRCC3O43542 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
XRCC3O43542 RNU6-170P-201ENST00000362832 104 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 RNU6-363P-201ENST00000362895 105 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 Y_RNA.433-201ENST00000384089 102 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 RNU6-187P-201ENST00000384139 106 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 SNORD38.2-201ENST00000384470 69 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 RNU6-1061P-201ENST00000516530 99 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 AL162376.1-201ENST00000624117 175 ntBASIC0.19□□□□□ -2.38
XRCC3O43542 MTND5P18-201ENST00000445624 1801 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 MIR539-201ENST00000365690 78 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 RNU6-209P-201ENST00000384118 107 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 SNORD41.1-201ENST00000391000 69 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 SNORD63B-201ENST00000411005 70 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 RNU7-104P-201ENST00000459398 79 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 AC067863.3-201ENST00000624172 122 ntBASIC0.18□□□□□ -2.38
XRCC3O43542 Y_RNA.221-201ENST00000364248 96 ntBASIC0.17□□□□□ -2.38
XRCC3O43542 Y_RNA.344-201ENST00000365381 112 ntBASIC0.17□□□□□ -2.38
XRCC3O43542 RNU6-35P-201ENST00000384530 107 ntBASIC0.17□□□□□ -2.38
XRCC3O43542 MIR548L-201ENST00000408303 86 ntBASIC0.17□□□□□ -2.38
XRCC3O43542 RNA5SP285-201ENST00000516619 119 ntBASIC0.17□□□□□ -2.38
XRCC3O43542 RNU6-850P-201ENST00000516934 103 ntBASIC0.17□□□□□ -2.38
XRCC3O43542 SNORA9.1-201ENST00000362412 131 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 RNU6-1313P-201ENST00000362622 102 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 RNU6-1260P-201ENST00000362944 107 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 Y_RNA.346-201ENST00000365385 112 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 SNORA7.5-201ENST00000410672 110 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 RNU7-195P-201ENST00000458793 62 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 Y_RNA.809-201ENST00000516058 95 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 RNU6-1018P-201ENST00000516577 106 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 RNU1-29P-201ENST00000606574 126 ntBASIC0.16□□□□□ -2.38
XRCC3O43542 Y_RNA.35-201ENST00000362601 101 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 Y_RNA.342-201ENST00000365352 113 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 Y_RNA.586-201ENST00000391146 98 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 RNU6-772P-201ENST00000516042 105 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 RNU6-1006P-201ENST00000516998 103 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 MIR4752-201ENST00000579672 72 ntBASIC0.15□□□□□ -2.39
XRCC3O43542 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.14□□□□□ -2.39
XRCC3O43542 RNU6-1211P-201ENST00000459179 105 ntBASIC0.14□□□□□ -2.39
XRCC3O43542 RNU7-106P-201ENST00000459514 67 ntBASIC0.14□□□□□ -2.39
XRCC3O43542 AL512310.12-203ENST00000640543 90 ntBASIC0.14□□□□□ -2.39
XRCC3O43542 Y_RNA.362-201ENST00000365518 110 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 RNU6-409P-201ENST00000384114 104 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 Y_RNA.507-201ENST00000384500 99 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 MIR760-201ENST00000390220 80 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 Y_RNA.630-201ENST00000411370 108 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 AL353813.1-201ENST00000440700 253 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 RNA5SP395-201ENST00000516567 118 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 MTND5P40-201ENST00000559945 246 ntBASIC0.13□□□□□ -2.39
XRCC3O43542 AL157777.2-201ENST00000258070 137 ntBASIC0.12□□□□□ -2.39
XRCC3O43542 SNORA42.1-201ENST00000363515 137 ntBASIC0.12□□□□□ -2.39
XRCC3O43542 RNA5SP128-201ENST00000365305 116 ntBASIC0.12□□□□□ -2.39
XRCC3O43542 RNU6-971P-201ENST00000516920 106 ntBASIC0.12□□□□□ -2.39
XRCC3O43542 MIR5706-201ENST00000579841 80 ntBASIC0.12□□□□□ -2.39
XRCC3O43542 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
XRCC3O43542 Y_RNA.155-201ENST00000363632 101 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 SNORD38.1-201ENST00000363863 68 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 Y_RNA.323-201ENST00000365157 109 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 SNORD50.2-201ENST00000365465 70 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 RPL39P34-201ENST00000477141 156 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 AL162726.3-218ENST00000636401 95 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 AC073869.9-201ENST00000641610 120 ntBASIC0.11□□□□□ -2.39
XRCC3O43542 RNU6-524P-201ENST00000384270 107 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 MIR516A2-201ENST00000384888 90 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 MIR516A1-201ENST00000385033 90 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU6-816P-201ENST00000390914 107 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU6-269P-201ENST00000391077 97 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU6-1268P-201ENST00000391214 107 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU6-1239P-201ENST00000391310 107 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU7-107P-201ENST00000459121 61 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU6-1265P-201ENST00000516342 103 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 MIR3920-201ENST00000581751 86 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 RNU6-90P-201ENST00000606352 106 ntBASIC0.1□□□□□ -2.39
XRCC3O43542 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
XRCC3O43542 RNU6-80P-201ENST00000384195 107 ntBASIC0.09□□□□□ -2.4
XRCC3O43542 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms