Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SNORD58C-201ENST00000365223 64 ntBASIC0.22□□□□□ -2.37
O00370 Y_RNA.360-201ENST00000365512 102 ntBASIC0.22□□□□□ -2.37
O00370 Y_RNA.568-201ENST00000384742 113 ntBASIC0.22□□□□□ -2.37
O00370 RNU6-257P-201ENST00000410238 98 ntBASIC0.22□□□□□ -2.37
O00370 AC244505.6-201ENST00000452829 130 ntBASIC0.22□□□□□ -2.37
O00370 RNU6-772P-201ENST00000516042 105 ntBASIC0.22□□□□□ -2.37
O00370 RNU6-1234P-201ENST00000516877 103 ntBASIC0.22□□□□□ -2.37
O00370 RNU7-161P-201ENST00000517289 62 ntBASIC0.22□□□□□ -2.37
O00370 MIR6828-201ENST00000636181 60 ntBASIC0.22□□□□□ -2.37
O00370 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
O00370 Y_RNA.155-201ENST00000363632 101 ntBASIC0.21□□□□□ -2.38
O00370 SNORD38.2-201ENST00000384470 69 ntBASIC0.21□□□□□ -2.38
O00370 MIR760-201ENST00000390220 80 ntBASIC0.21□□□□□ -2.38
O00370 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
O00370 SNORD63B-201ENST00000411005 70 ntBASIC0.21□□□□□ -2.38
O00370 RNU7-195P-201ENST00000458793 62 ntBASIC0.21□□□□□ -2.38
O00370 RNU6-971P-201ENST00000516920 106 ntBASIC0.21□□□□□ -2.38
O00370 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
O00370 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.21□□□□□ -2.38
O00370 MTND5P18-201ENST00000445624 1801 ntBASIC0.2□□□□□ -2.38
O00370 RNU6-170P-201ENST00000362832 104 ntBASIC0.2□□□□□ -2.38
O00370 Y_RNA.506-201ENST00000384494 102 ntBASIC0.2□□□□□ -2.38
O00370 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
O00370 AC097635.1-201ENST00000450678 155 ntBASIC0.2□□□□□ -2.38
O00370 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
O00370 Y_RNA.681-201ENST00000516445 113 ntBASIC0.2□□□□□ -2.38
O00370 RNU6-1212P-201ENST00000517023 104 ntBASIC0.2□□□□□ -2.38
O00370 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
O00370 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.2□□□□□ -2.38
O00370 RNU6-774P-201ENST00000363238 107 ntBASIC0.19□□□□□ -2.38
O00370 Y_RNA.525-201ENST00000384570 113 ntBASIC0.19□□□□□ -2.38
O00370 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.19□□□□□ -2.38
O00370 SPINT5P-201ENST00000448174 155 ntBASIC0.19□□□□□ -2.38
O00370 Y_RNA.809-201ENST00000516058 95 ntBASIC0.19□□□□□ -2.38
O00370 RNU6-850P-201ENST00000516934 103 ntBASIC0.19□□□□□ -2.38
O00370 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
O00370 AC067863.3-201ENST00000624172 122 ntBASIC0.19□□□□□ -2.38
O00370 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.19□□□□□ -2.38
O00370 Y_RNA.344-201ENST00000365381 112 ntBASIC0.18□□□□□ -2.38
O00370 RNU6-1126P-201ENST00000384002 107 ntBASIC0.18□□□□□ -2.38
O00370 Y_RNA.507-201ENST00000384500 99 ntBASIC0.18□□□□□ -2.38
O00370 MIR548I2-201ENST00000408348 149 ntBASIC0.18□□□□□ -2.38
O00370 Y_RNA.630-201ENST00000411370 108 ntBASIC0.18□□□□□ -2.38
O00370 RNU7-107P-201ENST00000459121 61 ntBASIC0.18□□□□□ -2.38
O00370 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
O00370 AL157777.2-201ENST00000258070 137 ntBASIC0.17□□□□□ -2.38
O00370 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
O00370 RNU6-726P-201ENST00000364680 107 ntBASIC0.17□□□□□ -2.38
O00370 RNU6-863P-201ENST00000515989 104 ntBASIC0.17□□□□□ -2.38
O00370 Y_RNA.68-201ENST00000362881 102 ntBASIC0.16□□□□□ -2.38
O00370 RNY4P6-201ENST00000363667 96 ntBASIC0.16□□□□□ -2.38
O00370 MIR539-201ENST00000365690 78 ntBASIC0.16□□□□□ -2.38
O00370 RNY1P5-201ENST00000383890 115 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-409P-201ENST00000384114 104 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-571P-201ENST00000384128 107 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-524P-201ENST00000384270 107 ntBASIC0.16□□□□□ -2.38
O00370 MT-TR-201ENST00000387439 65 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-816P-201ENST00000390914 107 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-1268P-201ENST00000391214 107 ntBASIC0.16□□□□□ -2.38
O00370 RNU6-1239P-201ENST00000391310 107 ntBASIC0.16□□□□□ -2.38
O00370 MIR3133-201ENST00000583157 78 ntBASIC0.16□□□□□ -2.38
O00370 RNA5SP403-201ENST00000363598 108 ntBASIC0.15□□□□□ -2.39
O00370 Y_RNA.346-201ENST00000365385 112 ntBASIC0.15□□□□□ -2.39
O00370 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
O00370 MIR516A2-201ENST00000384888 90 ntBASIC0.15□□□□□ -2.39
O00370 MIR516A1-201ENST00000385033 90 ntBASIC0.15□□□□□ -2.39
O00370 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
O00370 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.15□□□□□ -2.39
O00370 Y_RNA.342-201ENST00000365352 113 ntBASIC0.14□□□□□ -2.39
O00370 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
O00370 RNU7-106P-201ENST00000459514 67 ntBASIC0.14□□□□□ -2.39
O00370 RNU7-13P-201ENST00000516413 62 ntBASIC0.14□□□□□ -2.39
O00370 MIR499B-201ENST00000636498 73 ntBASIC0.14□□□□□ -2.39
O00370 RNU6-363P-201ENST00000362895 105 ntBASIC0.13□□□□□ -2.39
O00370 Y_RNA.362-201ENST00000365518 110 ntBASIC0.13□□□□□ -2.39
O00370 Y_RNA.586-201ENST00000391146 98 ntBASIC0.13□□□□□ -2.39
O00370 SNORA70.25-201ENST00000612741 95 ntBASIC0.13□□□□□ -2.39
O00370 Y_RNA.57-201ENST00000362806 113 ntBASIC0.12□□□□□ -2.39
O00370 Y_RNA.247-201ENST00000364500 92 ntBASIC0.12□□□□□ -2.39
O00370 MIR548I1-201ENST00000408810 149 ntBASIC0.12□□□□□ -2.39
O00370 RPL39P34-201ENST00000477141 156 ntBASIC0.12□□□□□ -2.39
O00370 RNU6-1232P-201ENST00000516299 86 ntBASIC0.12□□□□□ -2.39
O00370 Y_RNA.703-201ENST00000516846 111 ntBASIC0.12□□□□□ -2.39
O00370 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
O00370 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
O00370 RNU6-1313P-201ENST00000362622 102 ntBASIC0.11□□□□□ -2.39
O00370 RNA5SP128-201ENST00000365305 116 ntBASIC0.11□□□□□ -2.39
O00370 RNU6-269P-201ENST00000391077 97 ntBASIC0.11□□□□□ -2.39
O00370 MIR548G-201ENST00000408442 89 ntBASIC0.11□□□□□ -2.39
O00370 MIR5190-201ENST00000581537 80 ntBASIC0.11□□□□□ -2.39
O00370 SNORD114-5-201ENST00000362928 70 ntBASIC0.1□□□□□ -2.39
O00370 SNORD38.1-201ENST00000363863 68 ntBASIC0.1□□□□□ -2.39
O00370 RNU6-127P-201ENST00000390897 107 ntBASIC0.1□□□□□ -2.39
O00370 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
O00370 AC006210.1-201ENST00000424882 111 ntBASIC0.1□□□□□ -2.39
O00370 AL353813.1-201ENST00000440700 253 ntBASIC0.1□□□□□ -2.39
O00370 Y_RNA.649-201ENST00000459077 103 ntBASIC0.1□□□□□ -2.39
O00370 SNORD33.1-201ENST00000516213 88 ntBASIC0.1□□□□□ -2.39
O00370 RNU6-1265P-201ENST00000516342 103 ntBASIC0.1□□□□□ -2.39
O00370 AC104408.1-201ENST00000605241 170 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms