Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR5683-201ENST00000636514 76 ntBASIC-2.72□□□□□ -2.84
CHKB-CPT1BH3BT56 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 AC018880.2-201ENST00000414265 201 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 AL445567.1-201ENST00000439121 144 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-264P-201ENST00000517134 104 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 AP002795.1-201ENST00000534879 84 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 AL359880.1-201ENST00000621879 266 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 MIR1321-201ENST00000637766 79 ntBASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.73□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-1090P-201ENST00000364065 94 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 SNORA79-201ENST00000408376 140 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 FGF7P4-201ENST00000509595 295 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.74□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-79P-201ENST00000362511 107 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-978P-201ENST00000364371 103 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-483P-201ENST00000384088 108 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU7-164P-201ENST00000459221 62 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU7-123P-201ENST00000515911 60 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 AC009094.1-201ENST00000564443 426 ntBASIC-2.75□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.76□□□□□ -2.85
CHKB-CPT1BH3BT56 MIR616-201ENST00000385293 97 ntBASIC-2.76□□□□□ -2.85
CHKB-CPT1BH3BT56 SNORD116-25-201ENST00000516517 92 ntBASIC-2.76□□□□□ -2.85
CHKB-CPT1BH3BT56 VN1R91P-201ENST00000594377 169 ntBASIC-2.76□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.143-201ENST00000363520 106 ntBASIC-2.77□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-119P-201ENST00000364882 107 ntBASIC-2.77□□□□□ -2.85
CHKB-CPT1BH3BT56 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.77□□□□□ -2.85
CHKB-CPT1BH3BT56 MIR548F5-201ENST00000408421 86 ntBASIC-2.77□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-373P-201ENST00000411247 98 ntBASIC-2.77□□□□□ -2.85
CHKB-CPT1BH3BT56 AC021443.1-201ENST00000604478 211 ntBASIC-2.77□□□□□ -2.85
CHKB-CPT1BH3BT56 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU4-43P-201ENST00000410628 137 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 RPL35AP4-201ENST00000412007 102 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 RNU6-453P-201ENST00000516819 85 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 AC048344.4-201ENST00000619744 527 ntBASIC-2.78□□□□□ -2.85
CHKB-CPT1BH3BT56 RNA5SP405-201ENST00000363059 114 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 MIR496-201ENST00000385226 102 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 SNORD19-201ENST00000391191 68 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 RNA5SP236-201ENST00000516169 116 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU7-154P-201ENST00000516194 62 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-561P-201ENST00000516222 102 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-719P-201ENST00000516671 104 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 AC138907.4-201ENST00000570107 226 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 AC024614.3-201ENST00000637860 256 ntBASIC-2.79□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.8□□□□□ -2.86
CHKB-CPT1BH3BT56 AC096644.2-201ENST00000429278 159 ntBASIC-2.8□□□□□ -2.86
CHKB-CPT1BH3BT56 FGF7P7-201ENST00000514120 227 ntBASIC-2.8□□□□□ -2.86
CHKB-CPT1BH3BT56 MIR3139-201ENST00000579145 76 ntBASIC-2.8□□□□□ -2.86
CHKB-CPT1BH3BT56 snoU18.1-201ENST00000629629 71 ntBASIC-2.8□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 MIR181A1-201ENST00000385026 110 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-780P-201ENST00000391030 104 ntBASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.81□□□□□ -2.86
CHKB-CPT1BH3BT56 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 SNORA33.1-201ENST00000364957 130 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 MIR548A1-201ENST00000385041 97 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU7-24P-201ENST00000458867 62 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.639-201ENST00000458981 102 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 CYP3A54P-201ENST00000566950 75 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 AP000720.1-201ENST00000625091 483 ntBASIC-2.82□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-774P-201ENST00000363238 107 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-662P-201ENST00000384253 104 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-240P-201ENST00000516098 97 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 AC124864.2-201ENST00000624736 186 ntBASIC-2.83□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 HSPE1P25-201ENST00000455484 251 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-75P-201ENST00000515944 104 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 RNU6-521P-201ENST00000516663 105 ntBASIC-2.84□□□□□ -2.86
CHKB-CPT1BH3BT56 UBE2WP1-201ENST00000362030 340 ntBASIC-2.85□□□□□ -2.87
CHKB-CPT1BH3BT56 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.85□□□□□ -2.87
CHKB-CPT1BH3BT56 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.85□□□□□ -2.87
CHKB-CPT1BH3BT56 Z83846.1-201ENST00000446798 265 ntBASIC-2.85□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms