Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.78□□□□□ -2.28
SNX9Q9Y5X1 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
SNX9Q9Y5X1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.78□□□□□ -2.28
SNX9Q9Y5X1 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.35-201ENST00000362601 101 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.281-201ENST00000364774 94 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 RNU6-476P-201ENST00000384726 107 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 MIR34C-201ENST00000384831 77 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1064P-201ENST00000410626 104 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1006P-201ENST00000516998 103 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 MIR5000-201ENST00000577717 103 ntBASIC0.77□□□□□ -2.29
SNX9Q9Y5X1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 SNORD116-21-201ENST00000384507 92 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 MIR573-201ENST00000384964 99 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 MIR7-2-201ENST00000384970 110 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 RNU6-816P-201ENST00000390914 107 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1268P-201ENST00000391214 107 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1239P-201ENST00000391310 107 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 SNORD100-201ENST00000408573 76 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 SNORA7.5-201ENST00000410672 110 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
SNX9Q9Y5X1 SNORA63.5-201ENST00000363548 123 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.360-201ENST00000365512 102 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 AC002350.1-201ENST00000490759 375 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 RNU6-448P-201ENST00000517052 107 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 AC068339.1-201ENST00000526965 141 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 MTND5P34-201ENST00000568888 325 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1313P-201ENST00000362622 102 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.291-201ENST00000364886 113 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 SNORA72.6-201ENST00000384520 129 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1018P-201ENST00000516577 106 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 MIR6129-201ENST00000616087 109 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 AP001362.1-201ENST00000625165 124 ntBASIC0.74□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1290P-201ENST00000362957 109 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU4-58P-201ENST00000363192 141 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.247-201ENST00000364500 92 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.273-201ENST00000364703 102 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-865P-201ENST00000364772 107 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 U8.6-201ENST00000364939 135 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.309-201ENST00000365046 111 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.323-201ENST00000365157 109 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-409P-201ENST00000384114 104 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-880P-201ENST00000384526 107 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1081P-201ENST00000384537 107 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 MIR1912-201ENST00000410389 80 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-589P-201ENST00000516485 107 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 AP003327.1-201ENST00000529684 127 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 AC011195.1-201ENST00000578177 177 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 MIR5009-201ENST00000578736 100 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 MIR3612-201ENST00000579753 87 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
SNX9Q9Y5X1 RNU6-1056P-201ENST00000383996 107 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.507-201ENST00000384500 99 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 RNU6-291P-201ENST00000384720 107 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 DEFB131E-201ENST00000532329 154 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 MIR4500-201ENST00000579472 76 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 uc_338.16-201ENST00000621804 95 ntBASIC0.72□□□□□ -2.29
SNX9Q9Y5X1 Y_RNA.155-201ENST00000363632 101 ntBASIC0.71□□□□□ -2.3
SNX9Q9Y5X1 RNA5SP245-201ENST00000364239 121 ntBASIC0.71□□□□□ -2.3
SNX9Q9Y5X1 RNU6-1201P-201ENST00000384227 107 ntBASIC0.71□□□□□ -2.3
SNX9Q9Y5X1 MIR577-201ENST00000385196 96 ntBASIC0.71□□□□□ -2.3
SNX9Q9Y5X1 Y_RNA.629-201ENST00000411368 105 ntBASIC0.71□□□□□ -2.3
SNX9Q9Y5X1 MIR3613-201ENST00000579844 87 ntBASIC0.71□□□□□ -2.3
SNX9Q9Y5X1 MIR18A-201ENST00000362310 71 ntBASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 SNORA31.14-201ENST00000516728 116 ntBASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
SNX9Q9Y5X1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 SNORD114-26-201ENST00000363543 72 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 RNU6-1107P-201ENST00000364817 104 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 Y_RNA.377-201ENST00000365644 108 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 RNU6-1014P-201ENST00000383940 103 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 BX276092.1-201ENST00000427368 251 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.69□□□□□ -2.3
SNX9Q9Y5X1 RNU6-535P-201ENST00000384722 107 ntBASIC0.68□□□□□ -2.3
SNX9Q9Y5X1 SNRPGP12-201ENST00000449481 213 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms