Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 RNU6-1335P-201ENST00000365426 107 ntBASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 MIR1261-201ENST00000408659 82 ntBASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 RNU6-287P-201ENST00000516230 98 ntBASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 MIR4529-201ENST00000578110 78 ntBASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 AC103810.8-201ENST00000607347 118 ntBASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA4Q9Y5G9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 RNA5SP192-201ENST00000364404 120 ntBASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 SNORD75.2-201ENST00000408784 58 ntBASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 AC087499.2-201ENST00000432861 149 ntBASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA4Q9Y5G9 SNORD115-44-201ENST00000365391 82 ntBASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 RNA5SP508-201ENST00000411327 119 ntBASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 RNA5SP402-201ENST00000517148 110 ntBASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR7978-201ENST00000636158 59 ntBASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PCDHGA4Q9Y5G9 RNU7-24P-201ENST00000458867 62 ntBASIC2.75□□□□□ -1.97
PCDHGA4Q9Y5G9 SNORA31.25-201ENST00000517242 134 ntBASIC2.75□□□□□ -1.97
PCDHGA4Q9Y5G9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.75□□□□□ -1.97
PCDHGA4Q9Y5G9 AC073869.9-201ENST00000641610 120 ntBASIC2.75□□□□□ -1.97
PCDHGA4Q9Y5G9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PCDHGA4Q9Y5G9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR196B-201ENST00000384852 84 ntBASIC2.74□□□□□ -1.97
PCDHGA4Q9Y5G9 snoU13.21-201ENST00000459368 105 ntBASIC2.74□□□□□ -1.97
PCDHGA4Q9Y5G9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA4Q9Y5G9 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 RNU6-1039P-201ENST00000383931 107 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR512-1-201ENST00000384913 84 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 SNORD83.1-201ENST00000411362 77 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 SNORD109B-201ENST00000458961 67 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 SNORD109A-201ENST00000459128 67 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR6895-201ENST00000613497 78 ntBASIC2.73□□□□□ -1.97
PCDHGA4Q9Y5G9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR6073-201ENST00000352083 89 ntBASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR125B2-201ENST00000385128 89 ntBASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 SCARNA21.1-201ENST00000515996 128 ntBASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 MIR6509-201ENST00000614603 85 ntBASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA4Q9Y5G9 RNU6-369P-201ENST00000362515 102 ntBASIC2.71□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-446P-201ENST00000362827 106 ntBASIC2.71□□□□□ -1.98
PCDHGA4Q9Y5G9 RNA5SP245-201ENST00000364239 121 ntBASIC2.71□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-535P-201ENST00000384722 107 ntBASIC2.71□□□□□ -1.98
PCDHGA4Q9Y5G9 RNA5SP181-201ENST00000410246 98 ntBASIC2.71□□□□□ -1.98
PCDHGA4Q9Y5G9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-495P-201ENST00000362995 107 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-934P-201ENST00000365154 107 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 SNORA6-201ENST00000384033 151 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-439P-201ENST00000384188 106 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 RPL23AP42-201ENST00000471152 471 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR5694-201ENST00000581190 76 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 AL137847.3-201ENST00000611521 109 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 AL359851.1-201ENST00000569460 4997 ntBASIC2.7□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-936P-201ENST00000384005 107 ntBASIC2.69□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR144-201ENST00000384886 86 ntBASIC2.69□□□□□ -1.98
PCDHGA4Q9Y5G9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
PCDHGA4Q9Y5G9 AL645939.4-201ENST00000604495 135 ntBASIC2.69□□□□□ -1.98
PCDHGA4Q9Y5G9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHGA4Q9Y5G9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHGA4Q9Y5G9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-859P-201ENST00000362728 107 ntBASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 U8.2-201ENST00000363156 134 ntBASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR216B-201ENST00000390186 82 ntBASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 AC244505.6-201ENST00000452829 130 ntBASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR3605-201ENST00000583214 100 ntBASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PCDHGA4Q9Y5G9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 RNA5SP117-201ENST00000365294 118 ntBASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 AL359511.1-201ENST00000402970 211 ntBASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 AL513328.1-201ENST00000446460 224 ntBASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU7-193P-201ENST00000516723 65 ntBASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 AC008608.1-201ENST00000603910 127 ntBASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR6840-201ENST00000611937 71 ntBASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR26A1-201ENST00000362205 77 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 SNORA3A-201ENST00000364113 130 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU6-645P-201ENST00000364649 106 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR203A-201ENST00000384836 110 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 AC079804.2-201ENST00000490376 200 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 RNU7-13P-201ENST00000516413 62 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 NAMPTP3-201ENST00000569273 224 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR4771-2-201ENST00000577758 74 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 SNORA77B-201ENST00000578179 125 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 MIR4771-1-201ENST00000582617 74 ntBASIC2.66□□□□□ -1.98
PCDHGA4Q9Y5G9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PCDHGA4Q9Y5G9 SNORA70B-201ENST00000384210 135 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms