Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNA5SP292-201ENST00000390974 118 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 RNU6-243P-201ENST00000391140 107 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 MIR889-201ENST00000401280 79 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 SNORD63B-201ENST00000411005 70 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 RNU7-106P-201ENST00000459514 67 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 RNU6-1194P-201ENST00000516208 104 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
AP4E1Q9UPM8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 RNU6-811P-201ENST00000384069 107 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 AL450471.1-201ENST00000447509 127 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 SNORA44.1-201ENST00000517031 108 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 AL512310.8-201ENST00000550183 120 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 MIR3937-201ENST00000580135 106 ntBASIC1.85□□□□□ -2.11
AP4E1Q9UPM8 RNU6-403P-201ENST00000363163 104 ntBASIC1.84□□□□□ -2.11
AP4E1Q9UPM8 RNU6-132P-201ENST00000383863 107 ntBASIC1.84□□□□□ -2.11
AP4E1Q9UPM8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
AP4E1Q9UPM8 RNU6-482P-201ENST00000391068 107 ntBASIC1.84□□□□□ -2.11
AP4E1Q9UPM8 SNORD100-201ENST00000408573 76 ntBASIC1.84□□□□□ -2.11
AP4E1Q9UPM8 RNU7-185P-201ENST00000459215 60 ntBASIC1.84□□□□□ -2.11
AP4E1Q9UPM8 RNU6-466P-201ENST00000391224 103 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 RNU6-557P-201ENST00000516842 110 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 MIR3064-201ENST00000581130 66 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 MIR4536-1-201ENST00000583537 88 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 AC104996.3-201ENST00000590718 94 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 AC145423.2-201ENST00000610631 239 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 AC023934.1-201ENST00000574529 2389 ntBASIC1.83□□□□□ -2.12
AP4E1Q9UPM8 MIR519A1-201ENST00000385257 85 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 MIR1257-201ENST00000408490 117 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 TRAJ51-201ENST00000504127 63 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 AC015712.3-201ENST00000559380 164 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 SNORD92-201ENST00000585078 85 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
AP4E1Q9UPM8 SNORD83.1-201ENST00000411362 77 ntBASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 RPS27P16-201ENST00000425758 201 ntBASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 AC048334.1-201ENST00000477975 159 ntBASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 AC013244.2-201ENST00000603396 103 ntBASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
AP4E1Q9UPM8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 Y_RNA.13-201ENST00000362403 112 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 SNORA63.2-201ENST00000362603 126 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 RNU6-957P-201ENST00000363652 99 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 MIR1289-2-201ENST00000408360 111 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 SNORA18.5-201ENST00000516616 101 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 AC036111.3-201ENST00000526389 112 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 MIR6082-201ENST00000613604 109 ntBASIC1.8□□□□□ -2.12
AP4E1Q9UPM8 MIRLET7A1-201ENST00000362295 80 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 Y_RNA.536-201ENST00000384621 113 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 AC015818.7-201ENST00000428754 109 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 AC073261.1-201ENST00000429409 121 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 FGF7P7-201ENST00000514120 227 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 RNU6-765P-201ENST00000516916 99 ntBASIC1.79□□□□□ -2.12
AP4E1Q9UPM8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 SNORD113.3-201ENST00000364630 78 ntBASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 Y_RNA.491-201ENST00000384417 107 ntBASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 RNU7-195P-201ENST00000458793 62 ntBASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 Y_RNA.788-201ENST00000622394 112 ntBASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 AL161722.3-201ENST00000605789 2983 ntBASIC1.78□□□□□ -2.12
AP4E1Q9UPM8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 MIR101-2-201ENST00000362195 79 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 MIRLET7F1-201ENST00000362202 87 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.42-201ENST00000362660 108 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 RNU6-686P-201ENST00000364839 107 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 MIR635-201ENST00000384830 98 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 MIR548U-201ENST00000390728 81 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 SNORA31.2-201ENST00000516019 134 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 MIR548H5-201ENST00000580314 60 ntBASIC1.77□□□□□ -2.13
AP4E1Q9UPM8 RNU6-1094P-201ENST00000362416 104 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.56-201ENST00000362798 112 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 MIR520H-201ENST00000385126 88 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 AL606490.4-201ENST00000423117 127 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 AC092628.1-201ENST00000436250 252 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 Y_RNA.660-201ENST00000516002 120 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 RNU6-548P-201ENST00000517083 115 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 RNU7-10P-201ENST00000607194 63 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 MIR8081-201ENST00000611533 95 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 U7.4-201ENST00000614961 63 ntBASIC1.76□□□□□ -2.13
AP4E1Q9UPM8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 RNU6-1260P-201ENST00000362944 107 ntBASIC1.75□□□□□ -2.13
AP4E1Q9UPM8 RNU6-161P-201ENST00000363051 106 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms