Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 MIR1302-5-201ENST00000408164 150 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 RNU6-733P-201ENST00000410759 104 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 RNU7-61P-201ENST00000515897 61 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 RNU7-2P-201ENST00000516096 62 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 MIR4777-201ENST00000583710 86 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 MIR376B-201ENST00000614515 100 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 AL662814.1-201ENST00000617364 121 ntBASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CLIP2Q9UDT6 MIR103A2-201ENST00000362154 78 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 SNORD115-35-201ENST00000365122 82 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 RNU6-409P-201ENST00000384114 104 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.466-201ENST00000384294 113 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 MIR598-201ENST00000384868 97 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 U8.15-201ENST00000390947 134 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 RNU6-644P-201ENST00000391155 98 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 MTATP8P2-201ENST00000435212 202 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 snoU13.2-201ENST00000459201 104 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 DEFB131E-201ENST00000532329 154 ntBASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.81□□□□□ -2.28
CLIP2Q9UDT6 RNU6-170P-201ENST00000362832 104 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.107-201ENST00000363190 121 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 RNA5SP48-201ENST00000363969 126 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.290-201ENST00000364879 114 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 SNORD38B-201ENST00000384690 67 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 MIR563-201ENST00000385080 79 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 MIR1912-201ENST00000410389 80 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 RNU6-762P-201ENST00000517107 102 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 MIR4694-201ENST00000578534 80 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
CLIP2Q9UDT6 RNU6-1313P-201ENST00000362622 102 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.507-201ENST00000384500 99 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 RNU6-1067P-201ENST00000384752 107 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 SNORD77B-201ENST00000391112 67 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 SNORD83.1-201ENST00000411362 77 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 AC109327.2-201ENST00000448339 378 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 SCARNA23-201ENST00000516060 130 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.78-201ENST00000362970 110 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.190-201ENST00000363964 101 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 RNU6-1163P-201ENST00000364516 107 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.299-201ENST00000364973 94 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 RNU6-1165P-201ENST00000410119 107 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 RNA5SP261-201ENST00000410536 106 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 RNU7-62P-201ENST00000458856 62 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 AC138749.4-201ENST00000563970 127 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 AL442128.1-201ENST00000615151 90 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 U7.3-201ENST00000616123 62 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 MALAT1.1-201ENST00000618249 95 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 AL512310.12-203ENST00000640543 90 ntBASIC0.78□□□□□ -2.28
CLIP2Q9UDT6 RNU6-369P-201ENST00000362515 102 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 RNU6-949P-201ENST00000384040 107 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 RNU4-83P-201ENST00000410863 133 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 RNU6-893P-201ENST00000458841 100 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 SNORA40.13-201ENST00000516379 120 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 SNORA25.16-201ENST00000516741 121 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 AC036111.3-201ENST00000526389 112 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 AC090897.1-201ENST00000580909 226 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 RNU6-86P-201ENST00000606534 107 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 U6.109-201ENST00000636749 87 ntBASIC0.77□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.95-201ENST00000363079 95 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 SNORD73B-201ENST00000364394 72 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNY1P2-201ENST00000364820 117 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNU6-580P-201ENST00000365159 107 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNU6-396P-201ENST00000365369 105 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.369-201ENST00000365568 117 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.377-201ENST00000365644 108 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.388-201ENST00000383919 113 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 SNORA2B-201ENST00000384583 137 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNU6-613P-201ENST00000410412 108 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNA5SP237-201ENST00000410414 113 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.601-201ENST00000410500 113 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNU7-48P-201ENST00000458875 63 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNU11-2P-201ENST00000516898 142 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.818-201ENST00000618813 71 ntBASIC0.76□□□□□ -2.29
CLIP2Q9UDT6 RNA5SP133-201ENST00000363368 119 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 SNORD114-10-201ENST00000363409 72 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 RNU6-294P-201ENST00000364999 102 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.544-201ENST00000384650 113 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.593-201ENST00000410292 98 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 BX276092.1-201ENST00000427368 251 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 MIR2115-201ENST00000516657 100 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 Y_RNA.694-201ENST00000516677 117 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 RNU6-267P-201ENST00000516714 103 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 MIR4264-201ENST00000583520 66 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 AP000753.3-201ENST00000604083 169 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 AC062037.1-201ENST00000605302 128 ntBASIC0.75□□□□□ -2.29
CLIP2Q9UDT6 AC103810.7-201ENST00000607821 91 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 724.7 ms