Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-205P-201ENST00000390858 107 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 MIR942-201ENST00000401111 86 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 AC004965.1-201ENST00000413033 213 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 AC138749.4-201ENST00000563970 127 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 Y_RNA.12-201ENST00000362393 112 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 Y_RNA.283-201ENST00000364798 112 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 RNA5SP259-201ENST00000365541 109 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 RNU6-571P-201ENST00000384128 107 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 AC015818.7-201ENST00000428754 109 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 RNU6-322P-201ENST00000516010 103 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 MIR4255-201ENST00000579351 72 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 MIR4536-1-201ENST00000583537 88 ntBASIC2.08□□□□□ -2.08
LMCD1Q9NZU5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 SNORD36A-201ENST00000362874 73 ntBASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 AC244636.1-201ENST00000421152 228 ntBASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 AC244023.1-201ENST00000426884 112 ntBASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 AC242498.1-201ENST00000604134 111 ntBASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 AL662814.1-201ENST00000617364 121 ntBASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LMCD1Q9NZU5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 RNU6-154P-201ENST00000384306 106 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 MIR489-201ENST00000384923 84 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 MIR2113-201ENST00000459007 91 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 MIR4500-201ENST00000579472 76 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 YWHAEP2-201ENST00000580066 112 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 YWHAEP3-201ENST00000582767 121 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 PRELID3BP2-201ENST00000605362 201 ntBASIC2.06□□□□□ -2.08
LMCD1Q9NZU5 MIRLET7F1-201ENST00000362202 87 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 SNORA25.4-201ENST00000363666 124 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 RNU6-949P-201ENST00000384040 107 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 SNORA8.1-201ENST00000384250 140 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 MIR194-1-201ENST00000384892 85 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 MIR653-201ENST00000385279 96 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 RNU6-630P-201ENST00000391258 106 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 RNU4-62P-201ENST00000410125 130 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 BX276092.1-201ENST00000427368 251 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 AC079150.2-201ENST00000443733 78 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 snoU13.17-201ENST00000458802 104 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
LMCD1Q9NZU5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 RNU6-669P-201ENST00000365575 107 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 Y_RNA.443-201ENST00000384135 111 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 MIR588-201ENST00000384900 83 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 AC092628.1-201ENST00000436250 252 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 RNU6-922P-201ENST00000516753 99 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 SNORD92-201ENST00000585078 85 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 AL161722.3-201ENST00000605789 2983 ntBASIC2.04□□□□□ -2.08
LMCD1Q9NZU5 MIR633-201ENST00000384821 98 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 MIR516A2-201ENST00000384888 90 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 MIR516A1-201ENST00000385033 90 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 MIR548U-201ENST00000390728 81 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 SNORD111.1-201ENST00000516421 86 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 RNU6-250P-201ENST00000516958 103 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 MIR3192-201ENST00000584920 77 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 AL357312.1-201ENST00000603879 298 ntBASIC2.03□□□□□ -2.08
LMCD1Q9NZU5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.03□□□□□ -2.09
LMCD1Q9NZU5 SNORA25.3-201ENST00000363205 127 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 RNU6-291P-201ENST00000384720 107 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 MIR513A1-201ENST00000385138 129 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 snoU13.2-201ENST00000459201 104 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 RNU6-977P-201ENST00000516411 103 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 MIR4511-201ENST00000582784 87 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 U6.109-201ENST00000636749 87 ntBASIC2.02□□□□□ -2.09
LMCD1Q9NZU5 RNU6-681P-201ENST00000364012 104 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 SNORD45A-201ENST00000384512 84 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 SNORD116-24-201ENST00000384549 92 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 RNU6-1254P-201ENST00000391266 104 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 AC110620.1-201ENST00000416042 228 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LMCD1Q9NZU5 Y_RNA.42-201ENST00000362660 108 ntBASIC2□□□□□ -2.09
LMCD1Q9NZU5 RNU6-340P-201ENST00000364005 107 ntBASIC2□□□□□ -2.09
LMCD1Q9NZU5 RNU6-614P-201ENST00000384369 107 ntBASIC2□□□□□ -2.09
LMCD1Q9NZU5 SNORD41-201ENST00000386967 70 ntBASIC2□□□□□ -2.09
LMCD1Q9NZU5 RNU6-947P-201ENST00000516264 106 ntBASIC2□□□□□ -2.09
LMCD1Q9NZU5 U6.59-201ENST00000615686 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms