Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 MIR3651-201ENST00000630427 90 ntBASIC3.39□□□□□ -1.87
FOXD4L1Q9NU39 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD4L1Q9NU39 SNORD88.1-201ENST00000408684 91 ntBASIC3.38□□□□□ -1.87
FOXD4L1Q9NU39 RNU6-994P-201ENST00000410507 111 ntBASIC3.38□□□□□ -1.87
FOXD4L1Q9NU39 RNU7-24P-201ENST00000458867 62 ntBASIC3.38□□□□□ -1.87
FOXD4L1Q9NU39 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD4L1Q9NU39 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD4L1Q9NU39 SNORA48.2-201ENST00000390926 124 ntBASIC3.37□□□□□ -1.87
FOXD4L1Q9NU39 AL359511.1-201ENST00000402970 211 ntBASIC3.37□□□□□ -1.87
FOXD4L1Q9NU39 RNU4-47P-201ENST00000410876 114 ntBASIC3.37□□□□□ -1.87
FOXD4L1Q9NU39 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FOXD4L1Q9NU39 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.36□□□□□ -1.87
FOXD4L1Q9NU39 AC079150.2-201ENST00000443733 78 ntBASIC3.36□□□□□ -1.87
FOXD4L1Q9NU39 AL513328.1-201ENST00000446460 224 ntBASIC3.36□□□□□ -1.87
FOXD4L1Q9NU39 RNU6-977P-201ENST00000516411 103 ntBASIC3.36□□□□□ -1.87
FOXD4L1Q9NU39 AC107016.2-201ENST00000547968 190 ntBASIC3.36□□□□□ -1.87
FOXD4L1Q9NU39 MIR6509-201ENST00000614603 85 ntBASIC3.36□□□□□ -1.87
FOXD4L1Q9NU39 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 AC080100.1-201ENST00000624239 5356 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 SNORA71.1-201ENST00000364523 117 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 RNU1-119P-201ENST00000391122 165 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 AL591704.2-201ENST00000421658 181 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 SNORA31.2-201ENST00000516019 134 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 RN7SKP88-201ENST00000516847 250 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 7SK.8-201ENST00000612110 250 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 7SK.11-201ENST00000615477 250 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 7SK.13-201ENST00000622040 250 ntBASIC3.35□□□□□ -1.87
FOXD4L1Q9NU39 RNU6-1039P-201ENST00000383931 107 ntBASIC3.34□□□□□ -1.87
FOXD4L1Q9NU39 RNU6-1126P-201ENST00000384002 107 ntBASIC3.34□□□□□ -1.87
FOXD4L1Q9NU39 MIR4804-201ENST00000581683 73 ntBASIC3.33□□□□□ -1.88
FOXD4L1Q9NU39 RNU6-495P-201ENST00000362995 107 ntBASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 SNORD115-24-201ENST00000363528 82 ntBASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 Y_RNA.174-201ENST00000363781 105 ntBASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 AC022018.1-201ENST00000430685 241 ntBASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 RNU6-542P-201ENST00000516405 103 ntBASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 AL162274.2-201ENST00000614406 332 ntBASIC3.32□□□□□ -1.88
FOXD4L1Q9NU39 SNORA9.2-201ENST00000365361 133 ntBASIC3.31□□□□□ -1.88
FOXD4L1Q9NU39 RNU6ATAC33P-201ENST00000408647 126 ntBASIC3.31□□□□□ -1.88
FOXD4L1Q9NU39 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXD4L1Q9NU39 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXD4L1Q9NU39 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
FOXD4L1Q9NU39 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FOXD4L1Q9NU39 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
FOXD4L1Q9NU39 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXD4L1Q9NU39 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 RNA5SP374-201ENST00000362939 125 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 MIR100-201ENST00000385259 80 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 RN7SL499P-201ENST00000481141 276 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 SCARNA13-201ENST00000516672 275 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 NAMPTP3-201ENST00000569273 224 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 MIR3605-201ENST00000583214 100 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 AL157834.3-201ENST00000615543 103 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 AC073869.9-201ENST00000641610 120 ntBASIC3.29□□□□□ -1.88
FOXD4L1Q9NU39 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 RNA5SP393-201ENST00000363423 117 ntBASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 RNA5SP403-201ENST00000363598 108 ntBASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 SNORA31.14-201ENST00000516728 116 ntBASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 MIR3920-201ENST00000581751 86 ntBASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 AL359821.1-201ENST00000605519 182 ntBASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXD4L1Q9NU39 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXD4L1Q9NU39 Y_RNA.32-201ENST00000362589 110 ntBASIC3.27□□□□□ -1.89
FOXD4L1Q9NU39 MIR203A-201ENST00000384836 110 ntBASIC3.27□□□□□ -1.89
FOXD4L1Q9NU39 MIR5004-201ENST00000579078 107 ntBASIC3.27□□□□□ -1.89
FOXD4L1Q9NU39 MIR548AG2-201ENST00000581228 64 ntBASIC3.27□□□□□ -1.89
FOXD4L1Q9NU39 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXD4L1Q9NU39 Y_RNA.510-201ENST00000384511 114 ntBASIC3.26□□□□□ -1.89
FOXD4L1Q9NU39 MIR617-201ENST00000385030 97 ntBASIC3.26□□□□□ -1.89
FOXD4L1Q9NU39 RNA5SP210-201ENST00000391034 120 ntBASIC3.26□□□□□ -1.89
FOXD4L1Q9NU39 RNU7-56P-201ENST00000458744 62 ntBASIC3.26□□□□□ -1.89
FOXD4L1Q9NU39 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.26□□□□□ -1.89
FOXD4L1Q9NU39 uc_338.16-201ENST00000621804 95 ntBASIC3.26□□□□□ -1.89
FOXD4L1Q9NU39 RNU7-104P-201ENST00000459398 79 ntBASIC3.25□□□□□ -1.89
FOXD4L1Q9NU39 RNU7-21P-201ENST00000459430 62 ntBASIC3.25□□□□□ -1.89
FOXD4L1Q9NU39 MIR4635-201ENST00000583759 79 ntBASIC3.25□□□□□ -1.89
FOXD4L1Q9NU39 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
FOXD4L1Q9NU39 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.25□□□□□ -1.89
FOXD4L1Q9NU39 MIR1-1-201ENST00000362147 71 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 Y_RNA.375-201ENST00000365625 101 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 SNORA80D-201ENST00000384488 135 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 MIR17-201ENST00000385012 84 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 MIR934-201ENST00000401241 83 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 RPL23AP42-201ENST00000471152 471 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 RNA5SP341-201ENST00000516261 117 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 MIR8057-201ENST00000620957 69 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 AC006386.2-201ENST00000624491 75 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 AC012005.1-201ENST00000624575 75 ntBASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
FOXD4L1Q9NU39 Y_RNA.363-201ENST00000365529 113 ntBASIC3.23□□□□□ -1.89
FOXD4L1Q9NU39 MIR887-201ENST00000401258 79 ntBASIC3.23□□□□□ -1.89
FOXD4L1Q9NU39 RNU7-90P-201ENST00000459216 62 ntBASIC3.23□□□□□ -1.89
FOXD4L1Q9NU39 MIR548O2-201ENST00000616090 70 ntBASIC3.23□□□□□ -1.89
FOXD4L1Q9NU39 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
FOXD4L1Q9NU39 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 RNU6-369P-201ENST00000362515 102 ntBASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 U8.9-201ENST00000365667 134 ntBASIC3.22□□□□□ -1.89
FOXD4L1Q9NU39 MIR520F-201ENST00000384824 87 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms