Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6-613P-201ENST00000410412 108 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 RNA5SP220-201ENST00000516298 104 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 RNU6-165P-201ENST00000517170 99 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 AP003327.1-201ENST00000529684 127 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 MIR4500-201ENST00000579472 76 ntBASIC1.72□□□□□ -2.13
PDLIM7Q9NR12 RNA5SP133-201ENST00000363368 119 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 RNU6-497P-201ENST00000365316 104 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 MIR517C-201ENST00000385103 95 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 Y_RNA.609-201ENST00000410669 89 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 Y_RNA.620-201ENST00000411009 88 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 AL513043.2-201ENST00000573941 143 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 MIR6734-201ENST00000621166 68 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 AC025521.1-201ENST00000621624 286 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 AL161722.3-201ENST00000605789 2983 ntBASIC1.71□□□□□ -2.14
PDLIM7Q9NR12 MIR377-201ENST00000362145 69 ntBASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 Y_RNA.119-201ENST00000363301 96 ntBASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 RNU6-1125P-201ENST00000363601 107 ntBASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 RNU6-480P-201ENST00000384332 107 ntBASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 MT-TF-201ENST00000387314 71 ntBASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 AL512310.8-201ENST00000550183 120 ntBASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
PDLIM7Q9NR12 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PDLIM7Q9NR12 AL353770.2-201ENST00000620024 78 ntBASIC1.69□□□□□ -2.14
PDLIM7Q9NR12 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
PDLIM7Q9NR12 Y_RNA.219-201ENST00000364232 113 ntBASIC1.68□□□□□ -2.14
PDLIM7Q9NR12 RNU6-580P-201ENST00000365159 107 ntBASIC1.68□□□□□ -2.14
PDLIM7Q9NR12 RNU6-242P-201ENST00000384359 107 ntBASIC1.68□□□□□ -2.14
PDLIM7Q9NR12 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PDLIM7Q9NR12 RNU6-1276P-201ENST00000365372 104 ntBASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 SNORD78.1-201ENST00000390866 65 ntBASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 RNU6-1275P-201ENST00000391087 107 ntBASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 RNU4-83P-201ENST00000410863 133 ntBASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 SNRPGP12-201ENST00000449481 213 ntBASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 MIR5588-201ENST00000581890 63 ntBASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
PDLIM7Q9NR12 RNU6-979P-201ENST00000383896 107 ntBASIC1.66□□□□□ -2.14
PDLIM7Q9NR12 SNORD93-201ENST00000408813 74 ntBASIC1.66□□□□□ -2.14
PDLIM7Q9NR12 BX276092.1-201ENST00000427368 251 ntBASIC1.66□□□□□ -2.14
PDLIM7Q9NR12 AC048334.1-201ENST00000477975 159 ntBASIC1.66□□□□□ -2.14
PDLIM7Q9NR12 RNU6-850P-201ENST00000516934 103 ntBASIC1.66□□□□□ -2.14
PDLIM7Q9NR12 MIR96-201ENST00000362288 78 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 RPS27P16-201ENST00000425758 201 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 MIR18B-201ENST00000454574 71 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 MIR4491-201ENST00000581087 68 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 MIR8066-201ENST00000617280 78 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 AC008163.1-202ENST00000636004 2889 ntBASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.57-201ENST00000362806 113 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 RNU6-1124P-201ENST00000384169 107 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.611-201ENST00000410682 108 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 RNU6-1054P-201ENST00000411293 104 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 AL354695.1-201ENST00000427935 228 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 SNORA25.16-201ENST00000516741 121 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 AC022709.1-201ENST00000615967 87 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
PDLIM7Q9NR12 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 RNU6-228P-201ENST00000362700 106 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 RNU6-509P-201ENST00000363519 107 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 RNU6-571P-201ENST00000384128 107 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.588-201ENST00000391254 102 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.685-201ENST00000516532 108 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 RNU6-531P-201ENST00000516694 104 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 MIR6078-201ENST00000611069 100 ntBASIC1.63□□□□□ -2.15
PDLIM7Q9NR12 RNU6-633P-201ENST00000362612 103 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 RNU6-403P-201ENST00000363163 104 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 RNU1-36P-201ENST00000365130 165 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 AL161932.1-201ENST00000437408 146 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 SNORA31.2-201ENST00000516019 134 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 MIR548BB-201ENST00000626714 66 ntBASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PDLIM7Q9NR12 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 AC023934.1-201ENST00000574529 2389 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 SNORD114-26-201ENST00000363543 72 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 SNORA75.2-201ENST00000391138 150 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 SNORA75.3-201ENST00000391231 150 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 SNORD83.1-201ENST00000411362 77 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 MIR6779-201ENST00000617283 64 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 MIR3202-2-201ENST00000635980 79 ntBASIC1.61□□□□□ -2.15
PDLIM7Q9NR12 SNORD115-27-201ENST00000364430 82 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 SNORD113.3-201ENST00000364630 78 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.363-201ENST00000365529 113 ntBASIC1.6□□□□□ -2.15
PDLIM7Q9NR12 Y_RNA.426-201ENST00000384068 113 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms