Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC0.88□□□□□ -2.27
KRTAP4-3Q9BYR4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 AC010733.2-201ENST00000589496 5702 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 MAPK10-266ENST00000641066 6555 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-249P-201ENST00000363016 102 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 Y_RNA.204-201ENST00000364112 102 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 Y_RNA.320-201ENST00000365144 102 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 Y_RNA.335-201ENST00000365299 96 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-805P-201ENST00000365643 106 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-851P-201ENST00000384565 107 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR125B2-201ENST00000385128 89 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-258P-201ENST00000390884 101 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORA17.3-201ENST00000391159 129 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORA3.2-201ENST00000408221 125 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP508-201ENST00000411327 119 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 AL591806.2-201ENST00000433122 173 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 AC009474.2-201ENST00000451383 136 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 AC244505.6-201ENST00000452829 130 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU7-62P-201ENST00000458856 62 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 HMGB1P22-201ENST00000505315 124 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-863P-201ENST00000515989 104 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-1161P-201ENST00000516176 102 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-68P-201ENST00000516576 104 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-765P-201ENST00000516916 99 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-586P-201ENST00000517265 104 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR3170-201ENST00000582699 77 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 LINC00901.1-201ENST00000617252 152 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 AL021368.2-201ENST00000606125 5352 ntBASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC0.87□□□□□ -2.27
KRTAP4-3Q9BYR4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-627P-201ENST00000364032 102 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP245-201ENST00000364239 121 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU1-51P-201ENST00000365345 176 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR582-201ENST00000365731 98 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD45C-201ENST00000383893 79 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-546P-201ENST00000383991 107 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 MT-TY-201ENST00000387409 66 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORA17.4-201ENST00000391287 132 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP247-201ENST00000411181 105 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 AL354695.1-201ENST00000427935 228 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 AL356320.1-201ENST00000429616 163 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 snoU13.4-201ENST00000458916 104 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-322P-201ENST00000516010 103 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP282-201ENST00000516355 108 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR3186-201ENST00000577404 85 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD53-201ENST00000579969 78 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR4264-201ENST00000583520 66 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 AL096840.1-201ENST00000603287 93 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 PRELID3BP2-201ENST00000605362 201 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 uc_338.14-201ENST00000613162 166 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 U6.96-201ENST00000636425 70 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 MAPK10-362ENST00000641864 4484 ntBASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
KRTAP4-3Q9BYR4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 AC108206.1-201ENST00000570186 4159 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR26A1-201ENST00000362205 77 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 SNORD115-25-201ENST00000362619 82 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 RNA5SP403-201ENST00000363598 108 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU6-580P-201ENST00000365159 107 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 Y_RNA.442-201ENST00000384131 102 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR520C-201ENST00000385005 87 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR196A1-201ENST00000388006 70 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 Z98742.2-201ENST00000431564 187 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 AC009969.1-201ENST00000438726 172 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 RPS29P1-201ENST00000465274 159 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU7-41P-201ENST00000515917 61 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 MIR6733-201ENST00000635723 61 ntBASIC0.85□□□□□ -2.27
KRTAP4-3Q9BYR4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms