Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-554P-201ENST00000410466 106 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 USP9YP23-201ENST00000455085 407 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 RNU7-137P-201ENST00000516788 62 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 AC090425.1-201ENST00000610007 140 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 AL132765.2-201ENST00000610812 351 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 AC122108.2-201ENST00000611946 526 ntBASIC-1.91□□□□□ -2.71
COL12A1Q99715 AC093729.1-201ENST00000513074 128 ntBASIC-1.91□□□□□ -2.72
COL12A1Q99715 SNORA63.2-201ENST00000362603 126 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 MIR548C-201ENST00000384815 97 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 RNU6-583P-201ENST00000516012 92 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 RNU6-601P-201ENST00000384540 107 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.92□□□□□ -2.72
COL12A1Q99715 MTND3P22-201ENST00000510932 243 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 RNU6-864P-201ENST00000516256 108 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AC119751.7-201ENST00000600494 245 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AC005014.3-201ENST00000605985 190 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 U4.4-201ENST00000620626 117 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 MTCO2P21-201ENST00000419780 677 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 MTND4LP18-201ENST00000526864 291 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 UBL5P4-201ENST00000562584 236 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 MIR5188-201ENST00000583467 113 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AC092807.2-201ENST00000609367 243 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AL512427.1-201ENST00000618593 349 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AC087741.2-201ENST00000619415 172 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AC073534.2-201ENST00000620377 381 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 AC120349.2-201ENST00000625002 298 ntBASIC-1.92□□□□□ -2.72
COL12A1Q99715 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 MTND3P12-201ENST00000559068 328 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 Z99129.1-201ENST00000612510 255 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 U2.7-201ENST00000619197 100 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 SNORA22.1-201ENST00000362701 134 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 RNU6-891P-201ENST00000384280 111 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 MIR125B1-201ENST00000385236 88 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 SNORA36B-201ENST00000410438 131 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 SNORD67.1-201ENST00000516618 108 ntBASIC-1.93□□□□□ -2.72
COL12A1Q99715 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU7-149P-201ENST00000516739 59 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 MIR7978-201ENST00000636158 59 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU6-698P-201ENST00000363523 107 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU6-34P-201ENST00000364874 107 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU6-192P-201ENST00000391253 100 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 FGF7P7-201ENST00000514120 227 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU2-35P-201ENST00000516446 142 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 AC019193.3-201ENST00000609144 554 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 AC009248.2-201ENST00000619826 254 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU6-382P-201ENST00000365181 106 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 SNORD113-2-201ENST00000391082 72 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU6-612P-201ENST00000516909 102 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 U2.17-201ENST00000611454 95 ntBASIC-1.94□□□□□ -2.72
COL12A1Q99715 RNU6-387P-201ENST00000411331 105 ntBASIC-1.95□□□□□ -2.72
COL12A1Q99715 RNU6-191P-201ENST00000516295 94 ntBASIC-1.95□□□□□ -2.72
COL12A1Q99715 AC124864.2-201ENST00000624736 186 ntBASIC-1.95□□□□□ -2.72
COL12A1Q99715 RNU6-162P-201ENST00000516228 103 ntBASIC-1.95□□□□□ -2.72
COL12A1Q99715 RNU6-267P-201ENST00000516714 103 ntBASIC-1.95□□□□□ -2.72
COL12A1Q99715 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 MIR450B-201ENST00000401182 78 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 AL603910.2-201ENST00000407268 136 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 RNU7-113P-201ENST00000459273 62 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 AC022140.2-201ENST00000623500 188 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 AP001362.1-201ENST00000625165 124 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 RNU6-656P-201ENST00000516785 107 ntBASIC-1.96□□□□□ -2.72
COL12A1Q99715 SNORD27-201ENST00000363981 72 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.97□□□□□ -2.72
COL12A1Q99715 MIR410-201ENST00000362222 80 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 RNU6-445P-201ENST00000516949 107 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 MTATP6P24-201ENST00000576835 677 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 MIR4724-201ENST00000579485 89 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 AC024933.1-201ENST00000608472 348 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 MIR6841-201ENST00000637129 72 ntBASIC-1.97□□□□□ -2.72
COL12A1Q99715 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.97□□□□□ -2.73
COL12A1Q99715 RNU6-520P-201ENST00000384717 104 ntBASIC-1.97□□□□□ -2.73
COL12A1Q99715 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.97□□□□□ -2.73
COL12A1Q99715 AL158209.2-201ENST00000619266 216 ntBASIC-1.97□□□□□ -2.73
COL12A1Q99715 AC090971.5-201ENST00000621102 293 ntBASIC-1.97□□□□□ -2.73
COL12A1Q99715 AC021613.1-201ENST00000623880 111 ntBASIC-1.97□□□□□ -2.73
COL12A1Q99715 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 MTCO1P27-201ENST00000448269 226 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 MIR5696-201ENST00000578474 85 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.98□□□□□ -2.73
COL12A1Q99715 AP003357.1-201ENST00000604497 148 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 RNU7-115P-201ENST00000516433 55 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 RNU7-51P-201ENST00000516560 62 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 RNU7-160P-201ENST00000516660 62 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 AC104010.1-201ENST00000616889 150 ntBASIC-1.98□□□□□ -2.73
COL12A1Q99715 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.99□□□□□ -2.73
COL12A1Q99715 MIR4536-1-201ENST00000583537 88 ntBASIC-1.99□□□□□ -2.73
COL12A1Q99715 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.99□□□□□ -2.73
COL12A1Q99715 MIR494-201ENST00000349529 81 ntBASIC-1.99□□□□□ -2.73
COL12A1Q99715 RNY4P19-201ENST00000362530 96 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms