Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RNU6-718P-201ENST00000516166 105 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.32□□□□□ -2.62
LYSMD1Q96S90 UBE2WP1-201ENST00000362030 340 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 SNORD114-17-201ENST00000364699 75 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 RNU6-326P-201ENST00000365480 107 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 RNU6-243P-201ENST00000391140 107 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 AC069439.1-201ENST00000494739 167 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.33□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 RNU6-616P-201ENST00000384353 107 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 MIR34C-201ENST00000384831 77 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 MTND1P29-201ENST00000448112 647 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 RNU7-164P-201ENST00000459221 62 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 RNU6-240P-201ENST00000516098 97 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 AC021443.1-201ENST00000604478 211 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 AC113139.1-201ENST00000605049 239 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 AC025253.1-201ENST00000613623 543 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 MIR4320-201ENST00000636981 65 ntBASIC-1.34□□□□□ -2.62
LYSMD1Q96S90 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 RNA5SP192-201ENST00000364404 120 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 RNU6-54P-201ENST00000365563 107 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 SNORD116-1-201ENST00000384335 95 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 MIR124-2-201ENST00000385081 109 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 RNY4P36-201ENST00000391116 96 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 MIR1277-201ENST00000408536 78 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 RNA5SP266-201ENST00000410273 108 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 RNU7-123P-201ENST00000515911 60 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 RN7SKP19-201ENST00000516016 252 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 AL442663.2-201ENST00000554385 511 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 MIR548O2-201ENST00000616090 70 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 AC002553.4-201ENST00000616896 331 ntBASIC-1.35□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 RNU1-115P-201ENST00000365329 160 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 SNORD116-29-201ENST00000384516 83 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 RNU6-592P-201ENST00000411333 103 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 AL121914.1-201ENST00000450188 156 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 AC138907.4-201ENST00000570107 226 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 MIR3115-201ENST00000577915 68 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 AC084782.3-201ENST00000612282 578 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 AC084781.2-201ENST00000615568 161 ntBASIC-1.36□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 RNU6-957P-201ENST00000363652 99 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 MIR548F1-201ENST00000408667 84 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 RNU4-43P-201ENST00000410628 137 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 U4.5-201ENST00000617137 123 ntBASIC-1.37□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.38□□□□□ -2.63
LYSMD1Q96S90 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.38□□□□□ -2.63
LYSMD1Q96S90 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.38□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 SNORD101-201ENST00000384027 73 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 MIR216B-201ENST00000390186 82 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 RNU6-381P-201ENST00000391259 108 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 RNU6-121P-201ENST00000410525 99 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 AC138393.2-201ENST00000414742 246 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 MIR6773-201ENST00000612812 74 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 AC090574.1-201ENST00000623186 233 ntBASIC-1.39□□□□□ -2.63
LYSMD1Q96S90 SNORD36A-201ENST00000362874 73 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 SNORD38.2-201ENST00000384470 69 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 SNORD116-6-201ENST00000384711 96 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 MIR3165-201ENST00000579874 75 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 AP000770.2-201ENST00000623694 100 ntBASIC-1.4□□□□□ -2.63
LYSMD1Q96S90 SNORD114-4-201ENST00000363962 75 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 RNA5SP236-201ENST00000516169 116 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.41□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.42□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.42□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.42□□□□□ -2.64
LYSMD1Q96S90 MIRLET7B-201ENST00000385140 83 ntBASIC-1.42□□□□□ -2.64
LYSMD1Q96S90 RNU6-588P-201ENST00000410281 105 ntBASIC-1.42□□□□□ -2.64
LYSMD1Q96S90 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.42□□□□□ -2.64
LYSMD1Q96S90 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms