Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 RNU6-382P-201ENST00000365181 106 ntBASIC-4.2□□□□□ -3.08
VPS13AQ96RL7 SNORD61-201ENST00000384252 73 ntBASIC-4.2□□□□□ -3.08
VPS13AQ96RL7 AC120349.2-201ENST00000625002 298 ntBASIC-4.2□□□□□ -3.08
VPS13AQ96RL7 MIR4773-1-201ENST00000637203 78 ntBASIC-4.2□□□□□ -3.08
VPS13AQ96RL7 RNU5A-8P-201ENST00000364102 114 ntBASIC-4.2□□□□□ -3.08
VPS13AQ96RL7 RNU6-590P-201ENST00000365039 107 ntBASIC-4.2□□□□□ -3.08
VPS13AQ96RL7 Y_RNA.565-201ENST00000384719 101 ntBASIC-4.21□□□□□ -3.08
VPS13AQ96RL7 RNU6-1170P-201ENST00000515974 106 ntBASIC-4.21□□□□□ -3.08
VPS13AQ96RL7 MIR5188-201ENST00000583467 113 ntBASIC-4.21□□□□□ -3.08
VPS13AQ96RL7 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.21□□□□□ -3.08
VPS13AQ96RL7 RNU6-827P-201ENST00000365553 106 ntBASIC-4.22□□□□□ -3.08
VPS13AQ96RL7 AL118496.2-201ENST00000448300 230 ntBASIC-4.22□□□□□ -3.08
VPS13AQ96RL7 Y_RNA.683-201ENST00000516508 93 ntBASIC-4.22□□□□□ -3.08
VPS13AQ96RL7 ZNF92P2-201ENST00000600543 1059 ntBASIC-4.22□□□□□ -3.09
VPS13AQ96RL7 AC019193.3-201ENST00000609144 554 ntBASIC-4.22□□□□□ -3.09
VPS13AQ96RL7 AC012409.4-201ENST00000612923 249 ntBASIC-4.22□□□□□ -3.09
VPS13AQ96RL7 AC104010.1-201ENST00000616889 150 ntBASIC-4.22□□□□□ -3.09
VPS13AQ96RL7 RNU6-960P-201ENST00000364056 120 ntBASIC-4.22□□□□□ -3.09
VPS13AQ96RL7 RNU6-541P-201ENST00000384709 110 ntBASIC-4.23□□□□□ -3.09
VPS13AQ96RL7 MIR656-201ENST00000385224 78 ntBASIC-4.23□□□□□ -3.09
VPS13AQ96RL7 AL117187.1-201ENST00000555482 181 ntBASIC-4.23□□□□□ -3.09
VPS13AQ96RL7 MTND3P12-201ENST00000559068 328 ntBASIC-4.23□□□□□ -3.09
VPS13AQ96RL7 Y_RNA.74-201ENST00000362911 99 ntBASIC-4.24□□□□□ -3.09
VPS13AQ96RL7 AL691482.2-201ENST00000457453 84 ntBASIC-4.24□□□□□ -3.09
VPS13AQ96RL7 AC018638.8-201ENST00000588755 281 ntBASIC-4.24□□□□□ -3.09
VPS13AQ96RL7 AC009248.2-201ENST00000619826 254 ntBASIC-4.24□□□□□ -3.09
VPS13AQ96RL7 RNU6-946P-201ENST00000383878 107 ntBASIC-4.24□□□□□ -3.09
VPS13AQ96RL7 RNU6-1228P-201ENST00000391014 107 ntBASIC-4.24□□□□□ -3.09
VPS13AQ96RL7 RNU6-254P-201ENST00000363377 107 ntBASIC-4.25□□□□□ -3.09
VPS13AQ96RL7 RNU6-520P-201ENST00000384717 104 ntBASIC-4.25□□□□□ -3.09
VPS13AQ96RL7 Y_RNA.521-201ENST00000384560 114 ntBASIC-4.25□□□□□ -3.09
VPS13AQ96RL7 PCMTD1P1-201ENST00000455560 355 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 MIR548AE2-201ENST00000583456 67 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 MIR3140-201ENST00000583685 90 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 RNU6-472P-201ENST00000384299 107 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 RNU6-656P-201ENST00000516785 107 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 RNU6-445P-201ENST00000516949 107 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 AC062037.1-201ENST00000605302 128 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 Y_RNA.123-201ENST00000363338 102 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 MIR548C-201ENST00000384815 97 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 SNORD11-201ENST00000459124 84 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 MIR4536-1-201ENST00000583537 88 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 AP003357.1-201ENST00000604497 148 ntBASIC-4.26□□□□□ -3.09
VPS13AQ96RL7 SNORD38.2-201ENST00000384470 69 ntBASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 RNU6-551P-201ENST00000516661 103 ntBASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 MIR2355-201ENST00000517199 87 ntBASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 RNU6-710P-201ENST00000410424 105 ntBASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 MIR376B-201ENST00000614515 100 ntBASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 AC092794.2-201ENST00000620933 563 ntBASIC-4.28□□□□□ -3.09
VPS13AQ96RL7 AC084782.3-201ENST00000612282 578 ntBASIC-4.28□□□□□ -3.1
VPS13AQ96RL7 RNU6-728P-201ENST00000365375 104 ntBASIC-4.29□□□□□ -3.1
VPS13AQ96RL7 RNU6-300P-201ENST00000459080 104 ntBASIC-4.29□□□□□ -3.1
VPS13AQ96RL7 MIR410-201ENST00000362222 80 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.173-201ENST00000363776 113 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 MIR7978-201ENST00000636158 59 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.299-201ENST00000364973 94 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 MIR4426-201ENST00000640330 63 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 SNORD1B-201ENST00000363091 84 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 CLPTM1LP1-201ENST00000604519 484 ntBASIC-4.3□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.101-201ENST00000363154 102 ntBASIC-4.31□□□□□ -3.1
VPS13AQ96RL7 AL080274.1-201ENST00000605565 220 ntBASIC-4.31□□□□□ -3.1
VPS13AQ96RL7 RNU2-35P-201ENST00000516446 142 ntBASIC-4.31□□□□□ -3.1
VPS13AQ96RL7 SNORA63-201ENST00000363450 132 ntBASIC-4.32□□□□□ -3.1
VPS13AQ96RL7 SNORD115-30-201ENST00000364117 82 ntBASIC-4.32□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.584-201ENST00000391090 114 ntBASIC-4.32□□□□□ -3.1
VPS13AQ96RL7 AL133173.2-201ENST00000614270 90 ntBASIC-4.32□□□□□ -3.1
VPS13AQ96RL7 RNU6-129P-201ENST00000391022 107 ntBASIC-4.32□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.105-201ENST00000363182 111 ntBASIC-4.32□□□□□ -3.1
VPS13AQ96RL7 MTND4LP7-201ENST00000431728 294 ntBASIC-4.33□□□□□ -3.1
VPS13AQ96RL7 CHEK2P4-201ENST00000450340 246 ntBASIC-4.33□□□□□ -3.1
VPS13AQ96RL7 Y_RNA.531-201ENST00000384589 121 ntBASIC-4.33□□□□□ -3.1
VPS13AQ96RL7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-4.33□□□□□ -3.1
VPS13AQ96RL7 RNU6-698P-201ENST00000363523 107 ntBASIC-4.34□□□□□ -3.1
VPS13AQ96RL7 RNU6-34P-201ENST00000364874 107 ntBASIC-4.34□□□□□ -3.1
VPS13AQ96RL7 RNU6-612P-201ENST00000516909 102 ntBASIC-4.34□□□□□ -3.1
VPS13AQ96RL7 RNU6-365P-201ENST00000517113 106 ntBASIC-4.34□□□□□ -3.1
VPS13AQ96RL7 AC009779.6-201ENST00000603972 165 ntBASIC-4.34□□□□□ -3.1
VPS13AQ96RL7 AL158211.2-201ENST00000607282 395 ntBASIC-4.35□□□□□ -3.1
VPS13AQ96RL7 MIR3674-201ENST00000636576 68 ntBASIC-4.35□□□□□ -3.1
VPS13AQ96RL7 MIR4790-201ENST00000577799 79 ntBASIC-4.35□□□□□ -3.11
VPS13AQ96RL7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-4.35□□□□□ -3.11
VPS13AQ96RL7 U4.4-201ENST00000620626 117 ntBASIC-4.35□□□□□ -3.11
VPS13AQ96RL7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-4.35□□□□□ -3.11
VPS13AQ96RL7 MTND5P26-201ENST00000426018 1752 ntBASIC-4.35□□□□□ -3.11
VPS13AQ96RL7 AC092954.2-201ENST00000609103 430 ntBASIC-4.36□□□□□ -3.11
VPS13AQ96RL7 RNU6-809P-201ENST00000384461 107 ntBASIC-4.36□□□□□ -3.11
VPS13AQ96RL7 SNORD113-2-201ENST00000391082 72 ntBASIC-4.36□□□□□ -3.11
VPS13AQ96RL7 C8orf59P2-201ENST00000603441 271 ntBASIC-4.36□□□□□ -3.11
VPS13AQ96RL7 AL158209.2-201ENST00000619266 216 ntBASIC-4.37□□□□□ -3.11
VPS13AQ96RL7 RNU6-470P-201ENST00000515954 104 ntBASIC-4.37□□□□□ -3.11
VPS13AQ96RL7 MIR1322-201ENST00000638013 71 ntBASIC-4.37□□□□□ -3.11
VPS13AQ96RL7 MTATP6P29-201ENST00000415057 132 ntBASIC-4.38□□□□□ -3.11
VPS13AQ96RL7 RNU6-65P-201ENST00000516332 98 ntBASIC-4.38□□□□□ -3.11
VPS13AQ96RL7 MRPS36P3-201ENST00000519284 130 ntBASIC-4.38□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms