Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 MIR4264-201ENST00000583520 66 ntBASIC1.88□□□□□ -2.11
SHISA4Q96DD7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SHISA4Q96DD7 MIR1323-201ENST00000408090 73 ntBASIC1.87□□□□□ -2.11
SHISA4Q96DD7 AC090897.1-201ENST00000580909 226 ntBASIC1.87□□□□□ -2.11
SHISA4Q96DD7 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
SHISA4Q96DD7 AL096861.1-201ENST00000610899 123 ntBASIC1.87□□□□□ -2.11
SHISA4Q96DD7 Y_RNA.788-201ENST00000622394 112 ntBASIC1.87□□□□□ -2.11
SHISA4Q96DD7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SHISA4Q96DD7 RNU6-439P-201ENST00000384188 106 ntBASIC1.86□□□□□ -2.11
SHISA4Q96DD7 MIR563-201ENST00000385080 79 ntBASIC1.86□□□□□ -2.11
SHISA4Q96DD7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SHISA4Q96DD7 MIR2115-201ENST00000516657 100 ntBASIC1.86□□□□□ -2.11
SHISA4Q96DD7 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
SHISA4Q96DD7 AL773524.1-201ENST00000614065 229 ntBASIC1.86□□□□□ -2.11
SHISA4Q96DD7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
SHISA4Q96DD7 MIR96-201ENST00000362288 78 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 MT-TN-201ENST00000387400 73 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 AC138749.4-201ENST00000563970 127 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 AC145423.2-201ENST00000610631 239 ntBASIC1.85□□□□□ -2.11
SHISA4Q96DD7 SNORA25.3-201ENST00000363205 127 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 RNA5SP133-201ENST00000363368 119 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SHISA4Q96DD7 MIR1302-7-201ENST00000408841 72 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 SNRPGP12-201ENST00000449481 213 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 AL133373.1-201ENST00000497098 94 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 RNU6-947P-201ENST00000516264 106 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 RNU7-153P-201ENST00000516455 62 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 AC140658.3-201ENST00000567603 271 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 SNORA77B-201ENST00000578179 125 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 MIR8074-201ENST00000615081 81 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 U6.109-201ENST00000636749 87 ntBASIC1.84□□□□□ -2.11
SHISA4Q96DD7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SHISA4Q96DD7 RNU6-478P-201ENST00000363904 110 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 RNU6-571P-201ENST00000384128 107 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 MIR1236-201ENST00000408340 102 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 RNU7-62P-201ENST00000458856 62 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 RNU11-2P-201ENST00000516898 142 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 AL157834.3-201ENST00000615543 103 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 MIR6740-201ENST00000618268 113 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 MIR6515-201ENST00000619843 57 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.83□□□□□ -2.12
SHISA4Q96DD7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHISA4Q96DD7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.82□□□□□ -2.12
SHISA4Q96DD7 MT-TF-201ENST00000387314 71 ntBASIC1.82□□□□□ -2.12
SHISA4Q96DD7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SHISA4Q96DD7 RNU6-850P-201ENST00000516934 103 ntBASIC1.82□□□□□ -2.12
SHISA4Q96DD7 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
SHISA4Q96DD7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.82□□□□□ -2.12
SHISA4Q96DD7 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.82□□□□□ -2.12
SHISA4Q96DD7 MIR30D-201ENST00000362283 70 ntBASIC1.81□□□□□ -2.12
SHISA4Q96DD7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.81□□□□□ -2.12
SHISA4Q96DD7 RNU6-205P-201ENST00000390858 107 ntBASIC1.81□□□□□ -2.12
SHISA4Q96DD7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.81□□□□□ -2.12
SHISA4Q96DD7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHISA4Q96DD7 AC008163.1-202ENST00000636004 2889 ntBASIC1.8□□□□□ -2.12
SHISA4Q96DD7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SHISA4Q96DD7 RNU4-83P-201ENST00000410863 133 ntBASIC1.8□□□□□ -2.12
SHISA4Q96DD7 AC087499.7-201ENST00000441958 109 ntBASIC1.8□□□□□ -2.12
SHISA4Q96DD7 SNORD4B-201ENST00000459083 72 ntBASIC1.8□□□□□ -2.12
SHISA4Q96DD7 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
SHISA4Q96DD7 AC114801.3-201ENST00000510231 177 ntBASIC1.8□□□□□ -2.12
SHISA4Q96DD7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SHISA4Q96DD7 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
SHISA4Q96DD7 AL450471.1-201ENST00000447509 127 ntBASIC1.79□□□□□ -2.12
SHISA4Q96DD7 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
SHISA4Q96DD7 U7.4-201ENST00000614961 63 ntBASIC1.79□□□□□ -2.12
SHISA4Q96DD7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SHISA4Q96DD7 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 MIR377-201ENST00000362145 69 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 RNU4-32P-201ENST00000363404 141 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 MIR320A-201ENST00000385302 82 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 BX276092.1-201ENST00000427368 251 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 MIR8063-201ENST00000621930 81 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 MIR6516-201ENST00000630554 81 ntBASIC1.78□□□□□ -2.12
SHISA4Q96DD7 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 RNA5SP264-201ENST00000363115 107 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 SCARNA18B-201ENST00000458806 135 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 RNU1-92P-201ENST00000517017 135 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 AP003716.2-201ENST00000528260 108 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 MIR3134-201ENST00000579433 74 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 AL353770.2-201ENST00000620024 78 ntBASIC1.77□□□□□ -2.13
SHISA4Q96DD7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 RNU1-93P-201ENST00000364704 169 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 SNORA72.6-201ENST00000384520 129 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 Y_RNA.545-201ENST00000384652 105 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 MIR18B-201ENST00000454574 71 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 snoU13.9-201ENST00000458927 103 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 snoU13.25-201ENST00000458945 104 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 SNORA25.13-201ENST00000516395 103 ntBASIC1.76□□□□□ -2.13
SHISA4Q96DD7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.76□□□□□ -2.13
SHISA4Q96DD7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SHISA4Q96DD7 RNU4-58P-201ENST00000363192 141 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms