Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNU7-62P-201ENST00000458856 62 ntBASIC2.74□□□□□ -1.97
NKX2-3Q8TAU0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX2-3Q8TAU0 MIR194-1-201ENST00000384892 85 ntBASIC2.73□□□□□ -1.97
NKX2-3Q8TAU0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.73□□□□□ -1.97
NKX2-3Q8TAU0 MIR2115-201ENST00000516657 100 ntBASIC2.73□□□□□ -1.97
NKX2-3Q8TAU0 SNORA31.25-201ENST00000517242 134 ntBASIC2.73□□□□□ -1.97
NKX2-3Q8TAU0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.73□□□□□ -1.97
NKX2-3Q8TAU0 Y_RNA.56-201ENST00000362798 112 ntBASIC2.72□□□□□ -1.97
NKX2-3Q8TAU0 RNU6-935P-201ENST00000410371 100 ntBASIC2.72□□□□□ -1.97
NKX2-3Q8TAU0 AC004965.1-201ENST00000413033 213 ntBASIC2.72□□□□□ -1.97
NKX2-3Q8TAU0 MIR514B-201ENST00000516774 80 ntBASIC2.72□□□□□ -1.97
NKX2-3Q8TAU0 MIR4498-201ENST00000577599 66 ntBASIC2.72□□□□□ -1.97
NKX2-3Q8TAU0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 MIR377-201ENST00000362145 69 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 MIR101-2-201ENST00000362195 79 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-1187P-201ENST00000364771 110 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 MIR18B-201ENST00000454574 71 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 MIR3192-201ENST00000584920 77 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 SNRPGP19-201ENST00000603826 189 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 U6.100-201ENST00000636230 99 ntBASIC2.71□□□□□ -1.98
NKX2-3Q8TAU0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 MIR6073-201ENST00000352083 89 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 SNORA25.3-201ENST00000363205 127 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 RNA5SP100-201ENST00000410903 110 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 RNA5SP59-201ENST00000410922 110 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 AL691482.2-201ENST00000457453 84 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 MIR5007-201ENST00000583098 95 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-3Q8TAU0 SNORA3A-201ENST00000364113 130 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-203P-201ENST00000384038 104 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 SNORA26.9-201ENST00000391322 122 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 SNORD93-201ENST00000408813 74 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 RNA5SP450-201ENST00000411206 102 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 RN7SL274P-201ENST00000492268 272 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 AC245884.12-201ENST00000615364 59 ntBASIC2.69□□□□□ -1.98
NKX2-3Q8TAU0 RNU1-36P-201ENST00000365130 165 ntBASIC2.68□□□□□ -1.98
NKX2-3Q8TAU0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.68□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-580P-201ENST00000365159 107 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 MIR221-201ENST00000385135 110 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 SNORD41-201ENST00000386967 70 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-1177P-201ENST00000391058 104 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 U3.27-201ENST00000391237 200 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 AC097635.1-201ENST00000450678 155 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-274P-201ENST00000459566 107 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-542P-201ENST00000516405 103 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-295P-201ENST00000516901 104 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 uc_338.6-201ENST00000613544 171 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 AL109933.3-201ENST00000619095 188 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 MIR6766-201ENST00000622641 72 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 MIR219B-201ENST00000637023 88 ntBASIC2.67□□□□□ -1.98
NKX2-3Q8TAU0 RNU6-654P-201ENST00000364373 107 ntBASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 SNORA67.3-201ENST00000384366 140 ntBASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 SNORA64-201ENST00000384674 134 ntBASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 RNU7-193P-201ENST00000516723 65 ntBASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 AC013244.2-201ENST00000603396 103 ntBASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NKX2-3Q8TAU0 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 SNORA16B-201ENST00000364674 135 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 MIR451A-201ENST00000385059 72 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 MIR524-201ENST00000385242 87 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-808P-201ENST00000391233 108 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 Y_RNA.722-201ENST00000517279 114 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 MIR4781-201ENST00000585250 76 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 AL049779.4-201ENST00000604500 156 ntBASIC2.65□□□□□ -1.99
NKX2-3Q8TAU0 SNORA31.17-201ENST00000516953 127 ntBASIC2.64□□□□□ -1.99
NKX2-3Q8TAU0 FO624990.1-201ENST00000636373 85 ntBASIC2.64□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-403P-201ENST00000363163 104 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-940P-201ENST00000363433 104 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 Y_RNA.375-201ENST00000365625 101 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-1052P-201ENST00000411398 104 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 AL161935.2-201ENST00000414627 60 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 MTND4LP1-201ENST00000446263 157 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-719P-201ENST00000516671 104 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 RNA5SP402-201ENST00000517148 110 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 AP003716.2-201ENST00000528260 108 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 MIR5002-201ENST00000584713 97 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 AC092634.7-201ENST00000621022 103 ntBASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-1079P-201ENST00000362861 110 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 Y_RNA.118-201ENST00000363300 101 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-1054P-201ENST00000411293 104 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 AC244098.3-201ENST00000424803 96 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 RNU6-1265P-201ENST00000516342 103 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 MIR3920-201ENST00000581751 86 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 MIR6516-201ENST00000630554 81 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 MIR4773-1-201ENST00000637203 78 ntBASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NKX2-3Q8TAU0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms