Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SNORA40.6-201ENST00000391153 128 ntBASIC2.37□□□□□ -2.03
NEDD1Q8NHV4 U6.100-201ENST00000636230 99 ntBASIC2.37□□□□□ -2.03
NEDD1Q8NHV4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NEDD1Q8NHV4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
NEDD1Q8NHV4 RNA5SP137-201ENST00000516833 135 ntBASIC2.36□□□□□ -2.03
NEDD1Q8NHV4 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.36□□□□□ -2.03
NEDD1Q8NHV4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEDD1Q8NHV4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NEDD1Q8NHV4 RNU6-664P-201ENST00000362381 107 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 Y_RNA.239-201ENST00000364444 113 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 RNU6-604P-201ENST00000390917 100 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 SNORD100-201ENST00000408573 76 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 RPS27P16-201ENST00000425758 201 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 snoU13.25-201ENST00000458945 104 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 AC097510.1-201ENST00000510945 133 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 MTRNR2L2-201ENST00000604882 87 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
NEDD1Q8NHV4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 MIR194-1-201ENST00000384892 85 ntBASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 RNA5SP270-201ENST00000411361 118 ntBASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.34□□□□□ -2.03
NEDD1Q8NHV4 RNU6-1187P-201ENST00000364771 110 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 RNY4P3-201ENST00000365254 95 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 Y_RNA.536-201ENST00000384621 113 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 MIR519A1-201ENST00000385257 85 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 SNORD41-201ENST00000386967 70 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 DEFB122-202ENST00000569013 197 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NEDD1Q8NHV4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 RNU4-58P-201ENST00000363192 141 ntBASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 RNA5SP48-201ENST00000363969 126 ntBASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 SNORD101-201ENST00000384027 73 ntBASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 SNORD111.1-201ENST00000516421 86 ntBASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 MIR4264-201ENST00000583520 66 ntBASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NEDD1Q8NHV4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 RNU6-1260P-201ENST00000362944 107 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 SNORA25.3-201ENST00000363205 127 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 RNU6-1052P-201ENST00000411398 104 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 RNU7-62P-201ENST00000458856 62 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 AC108210.2-201ENST00000503681 201 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 RNU6-719P-201ENST00000516671 104 ntBASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NEDD1Q8NHV4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 SNORA3A-201ENST00000364113 130 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 Y_RNA.258-201ENST00000364613 105 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 RNU6-396P-201ENST00000365369 105 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 MT-TF-201ENST00000387314 71 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 snoU13.23-201ENST00000458863 104 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 Y_RNA.809-201ENST00000516058 95 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 SNRPGP19-201ENST00000603826 189 ntBASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD1Q8NHV4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 RPL30P7-201ENST00000479312 323 ntBASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 RNA5SP182-201ENST00000516064 82 ntBASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 SNORA31.17-201ENST00000516953 127 ntBASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 AC013244.2-201ENST00000603396 103 ntBASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 AC069503.3-201ENST00000618674 145 ntBASIC2.29□□□□□ -2.04
NEDD1Q8NHV4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 RNU6-1054P-201ENST00000411293 104 ntBASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 RNU6-982P-201ENST00000516216 102 ntBASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
NEDD1Q8NHV4 RNU1-36P-201ENST00000365130 165 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 MIR764-201ENST00000390811 85 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 RNU6-360P-201ENST00000390944 104 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 RNU6-482P-201ENST00000391068 107 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 AC004965.1-201ENST00000413033 213 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 AC015712.3-201ENST00000559380 164 ntBASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NEDD1Q8NHV4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 RNU6-446P-201ENST00000362827 106 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 RNU6-1079P-201ENST00000362861 110 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 MT-TN-201ENST00000387400 73 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 RNU6-322P-201ENST00000516010 103 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 AP003716.2-201ENST00000528260 108 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 MIR6516-201ENST00000630554 81 ntBASIC2.26□□□□□ -2.05
NEDD1Q8NHV4 MIR7978-201ENST00000636158 59 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms