Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-1244P-201ENST00000363614 108 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 RNU6-865P-201ENST00000364772 107 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 RNU6-972P-201ENST00000391208 107 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 MIR548G-201ENST00000408442 89 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 RPS29P28-201ENST00000446439 141 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 AC022709.1-201ENST00000615967 87 ntBASIC1.77□□□□□ -2.13
USP48Q86UV5 RNA5SP325-201ENST00000363756 130 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 RNU6-580P-201ENST00000365159 107 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 RNU6-820P-201ENST00000384273 107 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 SNORA2B-201ENST00000384583 137 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
USP48Q86UV5 MIR1304-201ENST00000408243 91 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 RNU6-1165P-201ENST00000410119 107 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 RNU6-267P-201ENST00000516714 103 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 SNORA70.22-201ENST00000517160 124 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 AC138749.4-201ENST00000563970 127 ntBASIC1.76□□□□□ -2.13
USP48Q86UV5 Y_RNA.567-201ENST00000384736 106 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 RNU7-21P-201ENST00000459430 62 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 SNORD79.1-201ENST00000516069 84 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.75□□□□□ -2.13
USP48Q86UV5 RNU6-90P-201ENST00000606352 106 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 MIR6078-201ENST00000611069 100 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 AC012676.2-201ENST00000619258 186 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 AP001362.1-201ENST00000625165 124 ntBASIC1.75□□□□□ -2.13
USP48Q86UV5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
USP48Q86UV5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USP48Q86UV5 SNORD113.3-201ENST00000364630 78 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 RNU6-219P-201ENST00000364728 107 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 RNY1P2-201ENST00000364820 117 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 RNU6-675P-201ENST00000384236 104 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 MT-TF-201ENST00000387314 71 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.74□□□□□ -2.13
USP48Q86UV5 MIR6515-201ENST00000619843 57 ntBASIC1.74□□□□□ -2.13
USP48Q86UV5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USP48Q86UV5 HSBP1P2-201ENST00000299671 229 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 Y_RNA.73-201ENST00000362910 113 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 SNORD114-26-201ENST00000363543 72 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 SNORD12-201ENST00000391002 90 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 RNU6-402P-201ENST00000410678 103 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 RNU7-90P-201ENST00000459216 62 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 RNA5SP61-201ENST00000516453 100 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.73□□□□□ -2.13
USP48Q86UV5 Y_RNA.96-201ENST00000363092 109 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 RNU6-497P-201ENST00000365316 104 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 MIR222-201ENST00000384992 110 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 SPINT5P-201ENST00000448174 155 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 RPS29P23-201ENST00000458635 123 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 AC036111.3-201ENST00000526389 112 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 MIR6779-201ENST00000617283 64 ntBASIC1.72□□□□□ -2.13
USP48Q86UV5 RNU6-1275P-201ENST00000391087 107 ntBASIC1.71□□□□□ -2.14
USP48Q86UV5 SNORD111-201ENST00000408139 94 ntBASIC1.71□□□□□ -2.14
USP48Q86UV5 MIR18B-201ENST00000454574 71 ntBASIC1.71□□□□□ -2.14
USP48Q86UV5 AP003327.1-201ENST00000529684 127 ntBASIC1.71□□□□□ -2.14
USP48Q86UV5 AC133485.1-201ENST00000567176 124 ntBASIC1.71□□□□□ -2.14
USP48Q86UV5 SNORD116-10-201ENST00000363791 102 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 RNU1-93P-201ENST00000364704 169 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 MIR520E-201ENST00000384867 87 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 MIR181B2-201ENST00000385004 89 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 RNU4-83P-201ENST00000410863 133 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 Y_RNA.620-201ENST00000411009 88 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 snoU13.21-201ENST00000459368 105 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 AC022137.1-201ENST00000483735 151 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 AC090897.1-201ENST00000580909 226 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 IGLL4P-201ENST00000614590 133 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 AC106800.4-201ENST00000614905 153 ntBASIC1.7□□□□□ -2.14
USP48Q86UV5 RNA5SP327-201ENST00000362494 101 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 RNY1P1-201ENST00000364372 112 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 SNORA25-201ENST00000384384 134 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 SNORD116-22-201ENST00000384430 92 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 AC023827.1-201ENST00000569247 97 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 AL513043.2-201ENST00000573941 143 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 MIR4668-201ENST00000582284 70 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 AC025521.1-201ENST00000621624 286 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 AC008163.1-202ENST00000636004 2889 ntBASIC1.69□□□□□ -2.14
USP48Q86UV5 Y_RNA.119-201ENST00000363301 96 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 SNORD26-201ENST00000384147 75 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 SNORD78.1-201ENST00000390866 65 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 Y_RNA.588-201ENST00000391254 102 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 RNA5SP225-201ENST00000410874 135 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 MTND5P40-201ENST00000559945 246 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 MIR4500-201ENST00000579472 76 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 U6.109-201ENST00000636749 87 ntBASIC1.68□□□□□ -2.14
USP48Q86UV5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USP48Q86UV5 RNU6-228P-201ENST00000362700 106 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 RNA5SP133-201ENST00000363368 119 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 RNY1P4-201ENST00000384595 115 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 SNRPGP12-201ENST00000449481 213 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 RPS29P1-201ENST00000465274 159 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 MIR4491-201ENST00000581087 68 ntBASIC1.67□□□□□ -2.14
USP48Q86UV5 MIR7974-201ENST00000615835 79 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms