Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RPL30P7-201ENST00000479312 323 ntBASIC2.49□□□□□ -2.01
SH3RF1Q7Z6J0 MIR219B-201ENST00000637023 88 ntBASIC2.49□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-1051P-201ENST00000365471 102 ntBASIC2.48□□□□□ -2.01
SH3RF1Q7Z6J0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SH3RF1Q7Z6J0 RNA5SP276-201ENST00000362580 94 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 Y_RNA.207-201ENST00000364142 106 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 SNORA26.9-201ENST00000391322 122 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 AC092628.1-201ENST00000436250 252 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-1194P-201ENST00000516208 104 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 RNU6-531P-201ENST00000516694 104 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 RNU11-2P-201ENST00000516898 142 ntBASIC2.47□□□□□ -2.01
SH3RF1Q7Z6J0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-669P-201ENST00000365575 107 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 SNORD93-201ENST00000408813 74 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 Y_RNA.606-201ENST00000410579 103 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 SNORD63B-201ENST00000411005 70 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 MIR2113-201ENST00000459007 91 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 AL133373.1-201ENST00000497098 94 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 MIR4498-201ENST00000577599 66 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 MIR4511-201ENST00000582784 87 ntBASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SH3RF1Q7Z6J0 MIR377-201ENST00000362145 69 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 Y_RNA.371-201ENST00000365591 113 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-439P-201ENST00000384188 106 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 MIR4491-201ENST00000581087 68 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 MIR3675-201ENST00000583661 73 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 AC103706.3-201ENST00000636297 85 ntBASIC2.45□□□□□ -2.02
SH3RF1Q7Z6J0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 AL596028.1-201ENST00000326971 197 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 MIR101-2-201ENST00000362195 79 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 SNORA6-201ENST00000384033 151 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-895P-201ENST00000384125 103 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 SNORD45A-201ENST00000384512 84 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 MIR1287-201ENST00000408492 90 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-250P-201ENST00000516958 103 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 MIR4781-201ENST00000585250 76 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 MIR6845-201ENST00000613182 61 ntBASIC2.44□□□□□ -2.02
SH3RF1Q7Z6J0 MIR103A2-201ENST00000362154 78 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-681P-201ENST00000364012 104 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 AC110620.1-201ENST00000416042 228 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 MIR18B-201ENST00000454574 71 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 AC015688.6-201ENST00000577737 104 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 MIR6516-201ENST00000630554 81 ntBASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-403P-201ENST00000363163 104 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 SNORD115-22-201ENST00000364456 82 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 SNORD116-24-201ENST00000384549 92 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 AC079150.2-201ENST00000443733 78 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 SNORA25.16-201ENST00000516741 121 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 RNU7-10P-201ENST00000607194 63 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 MIR8053-201ENST00000613344 75 ntBASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SH3RF1Q7Z6J0 MIR337-201ENST00000362281 93 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 RNY4P3-201ENST00000365254 95 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-614P-201ENST00000384369 107 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 MIR519A1-201ENST00000385257 85 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 AC108667.1-201ENST00000428618 249 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 RNU6-881P-201ENST00000516813 102 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 MIR8074-201ENST00000615081 81 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 U6.59-201ENST00000615686 107 ntBASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SH3RF1Q7Z6J0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SH3RF1Q7Z6J0 AL359851.1-201ENST00000569460 4997 ntBASIC2.4□□□□□ -2.03
SH3RF1Q7Z6J0 Y_RNA.239-201ENST00000364444 113 ntBASIC2.4□□□□□ -2.03
SH3RF1Q7Z6J0 SNORA17.3-201ENST00000391159 129 ntBASIC2.4□□□□□ -2.03
SH3RF1Q7Z6J0 uc_338.6-201ENST00000613544 171 ntBASIC2.4□□□□□ -2.03
SH3RF1Q7Z6J0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.4□□□□□ -2.03
SH3RF1Q7Z6J0 ZNF209P-201ENST00000593450 2304 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 RNA5SP264-201ENST00000363115 107 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 RNU1-36P-201ENST00000365130 165 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 RPS27P16-201ENST00000425758 201 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 MIR548H5-201ENST00000580314 60 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 MIR3140-201ENST00000583685 90 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 U6.81-201ENST00000612550 106 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 AP000553.5-201ENST00000641933 54 ntBASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SH3RF1Q7Z6J0 SNORD45.1-201ENST00000363181 77 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 MIR1185-1-201ENST00000408598 86 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 AL606490.4-201ENST00000423117 127 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 MIR4287-201ENST00000579398 78 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 MIR4696-201ENST00000581431 70 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 TRDV1-202ENST00000621643 102 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 MIR8063-201ENST00000621930 81 ntBASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SH3RF1Q7Z6J0 RNU6-1216P-201ENST00000362590 107 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 SNORA24B-201ENST00000384176 131 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 MIR633-201ENST00000384821 98 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 SNORD100-201ENST00000408573 76 ntBASIC2.37□□□□□ -2.03
SH3RF1Q7Z6J0 TRAJ51-201ENST00000504127 63 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 345.9 ms