Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 HSBP1P2-201ENST00000299671 229 ntBASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 Y_RNA.173-201ENST00000363776 113 ntBASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 RNY1P4-201ENST00000384595 115 ntBASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 AP003327.1-201ENST00000529684 127 ntBASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
LRRC55Q6ZSA7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 MIR377-201ENST00000362145 69 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 RNA5SP133-201ENST00000363368 119 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 SNORA2B-201ENST00000384583 137 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-613P-201ENST00000410412 108 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 AC025521.1-201ENST00000621624 286 ntBASIC1.46□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-997P-201ENST00000384725 107 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 MIR181B2-201ENST00000385004 89 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 MIR518E-201ENST00000385252 88 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.609-201ENST00000410669 89 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.620-201ENST00000411009 88 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 RN7SKP88-201ENST00000516847 250 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 AL513043.2-201ENST00000573941 143 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 7SK.8-201ENST00000612110 250 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 7SK.11-201ENST00000615477 250 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 7SK.13-201ENST00000622040 250 ntBASIC1.45□□□□□ -2.18
LRRC55Q6ZSA7 MIR96-201ENST00000362288 78 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.219-201ENST00000364232 113 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 MIR489-201ENST00000384923 84 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 MT-TF-201ENST00000387314 71 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-1275P-201ENST00000391087 107 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 SNRPGP12-201ENST00000449481 213 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 MIR4500-201ENST00000579472 76 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LRRC55Q6ZSA7 RNU4-83P-201ENST00000410863 133 ntBASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 BX276092.1-201ENST00000427368 251 ntBASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 MIR5588-201ENST00000581890 63 ntBASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.42□□□□□ -2.18
LRRC55Q6ZSA7 SNORD114-22-201ENST00000365423 72 ntBASIC1.42□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-242P-201ENST00000384359 107 ntBASIC1.42□□□□□ -2.18
LRRC55Q6ZSA7 SNORA40.6-201ENST00000391153 128 ntBASIC1.42□□□□□ -2.18
LRRC55Q6ZSA7 snoU13.21-201ENST00000459368 105 ntBASIC1.42□□□□□ -2.18
LRRC55Q6ZSA7 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-228P-201ENST00000362700 106 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-1125P-201ENST00000363601 107 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-1276P-201ENST00000365372 104 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-979P-201ENST00000383896 107 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-480P-201ENST00000384332 107 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 SNORD78.1-201ENST00000390866 65 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 AC048334.1-201ENST00000477975 159 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 RNU6-850P-201ENST00000516934 103 ntBASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LRRC55Q6ZSA7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
LRRC55Q6ZSA7 SNORD115-27-201ENST00000364430 82 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-1124P-201ENST00000384169 107 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 SNORA72.6-201ENST00000384520 129 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 Y_RNA.611-201ENST00000410682 108 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 RNA5SP225-201ENST00000410874 135 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 SNORA25.16-201ENST00000516741 121 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 AC008163.1-202ENST00000636004 2889 ntBASIC1.4□□□□□ -2.19
LRRC55Q6ZSA7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-509P-201ENST00000363519 107 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-580P-201ENST00000365159 107 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 SNORA75.2-201ENST00000391138 150 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 SNORA75.3-201ENST00000391231 150 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 SNORD93-201ENST00000408813 74 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 SNORA31.2-201ENST00000516019 134 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-531P-201ENST00000516694 104 ntBASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-571P-201ENST00000384128 107 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 SNORD83.1-201ENST00000411362 77 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 AC015818.7-201ENST00000428754 109 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 AC087499.7-201ENST00000441958 109 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 MIR4491-201ENST00000581087 68 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 MIR548BB-201ENST00000626714 66 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 MIR3202-2-201ENST00000635980 79 ntBASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-633P-201ENST00000362612 103 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 RNU6-403P-201ENST00000363163 104 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 RNU1-36P-201ENST00000365130 165 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 MIR18B-201ENST00000454574 71 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 MIR8066-201ENST00000617280 78 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 AC006160.2-201ENST00000637708 154 ntBASIC1.37□□□□□ -2.19
LRRC55Q6ZSA7 AC023934.1-201ENST00000574529 2389 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms