Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO4Q2I0M5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO4Q2I0M5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU6-654P-201ENST00000364373 107 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU1-51P-201ENST00000365345 176 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNA5SP465-201ENST00000391195 109 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 Y_RNA.588-201ENST00000391254 102 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 MIR1302-7-201ENST00000408841 72 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU6-935P-201ENST00000410371 100 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU7-62P-201ENST00000458856 62 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU6-274P-201ENST00000459566 107 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU6-982P-201ENST00000516216 102 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU6-542P-201ENST00000516405 103 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 SNORD111.1-201ENST00000516421 86 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 SNORA31.15-201ENST00000516771 132 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 MIR548H5-201ENST00000580314 60 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 MIR466-201ENST00000580653 84 ntBASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
RSPO4Q2I0M5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 RNU6-369P-201ENST00000362515 102 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 RNU6-446P-201ENST00000362827 106 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 SNORA25.5-201ENST00000363782 126 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 RNU6-936P-201ENST00000384005 107 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 MIR451A-201ENST00000385059 72 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 MIR653-201ENST00000385279 96 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 MIR5092-201ENST00000583139 88 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 uc_338.6-201ENST00000613544 171 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 MIR4773-1-201ENST00000637203 78 ntBASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RSPO4Q2I0M5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RSPO4Q2I0M5 MIR101-2-201ENST00000362195 79 ntBASIC2.16□□□□□ -2.06
RSPO4Q2I0M5 RNU6-940P-201ENST00000363433 104 ntBASIC2.16□□□□□ -2.06
RSPO4Q2I0M5 RNA5SP270-201ENST00000411361 118 ntBASIC2.16□□□□□ -2.06
RSPO4Q2I0M5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.16□□□□□ -2.06
RSPO4Q2I0M5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RSPO4Q2I0M5 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.06
RSPO4Q2I0M5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
RSPO4Q2I0M5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
RSPO4Q2I0M5 SNORA25.3-201ENST00000363205 127 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 RNA5SP192-201ENST00000364404 120 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 RNA5SP117-201ENST00000365294 118 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 Y_RNA.375-201ENST00000365625 101 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 U8.9-201ENST00000365667 134 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 RNU6-1177P-201ENST00000391058 104 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 RNA5SP501-201ENST00000410990 112 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 AC244098.3-201ENST00000424803 96 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 MTND4LP1-201ENST00000446263 157 ntBASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RSPO4Q2I0M5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 RNU6-403P-201ENST00000363163 104 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 RNU6-668P-201ENST00000364180 107 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 RNU6-382P-201ENST00000365181 106 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 RNU1-148P-201ENST00000384472 162 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 MT-TN-201ENST00000387400 73 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 SNORD93-201ENST00000408813 74 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 RPL30P7-201ENST00000479312 323 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 RNA5SP480-201ENST00000516840 109 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 MIR3192-201ENST00000584920 77 ntBASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RSPO4Q2I0M5 MIR21-201ENST00000362134 72 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 Y_RNA.56-201ENST00000362798 112 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 Y_RNA.258-201ENST00000364613 105 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 RNU6-1184P-201ENST00000384588 108 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 Y_RNA.540-201ENST00000384638 111 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 RNU6-1054P-201ENST00000411293 104 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 AC013244.2-201ENST00000603396 103 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
RSPO4Q2I0M5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RSPO4Q2I0M5 RNU1-36P-201ENST00000365130 165 ntBASIC2.12□□□□□ -2.07
RSPO4Q2I0M5 RNU6-1335P-201ENST00000365426 107 ntBASIC2.12□□□□□ -2.07
RSPO4Q2I0M5 MIR3920-201ENST00000581751 86 ntBASIC2.12□□□□□ -2.07
RSPO4Q2I0M5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RSPO4Q2I0M5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RSPO4Q2I0M5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 RNU6-203P-201ENST00000384038 104 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 AP1B1P2-201ENST00000416196 106 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 AC097635.1-201ENST00000450678 155 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 MIR2115-201ENST00000516657 100 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
RSPO4Q2I0M5 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
RSPO4Q2I0M5 SNORD113-4-201ENST00000364802 75 ntBASIC2.1□□□□□ -2.07
RSPO4Q2I0M5 SNORD41-201ENST00000386967 70 ntBASIC2.1□□□□□ -2.07
RSPO4Q2I0M5 RNU6-360P-201ENST00000390944 104 ntBASIC2.1□□□□□ -2.07
RSPO4Q2I0M5 Y_RNA.697-201ENST00000516776 113 ntBASIC2.1□□□□□ -2.07
RSPO4Q2I0M5 AL137847.3-201ENST00000611521 109 ntBASIC2.1□□□□□ -2.07
RSPO4Q2I0M5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RSPO4Q2I0M5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.09□□□□□ -2.07
RSPO4Q2I0M5 RNA5SP325-201ENST00000363756 130 ntBASIC2.09□□□□□ -2.07
RSPO4Q2I0M5 DEFA7P-201ENST00000382676 285 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms