Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MIR147A-201ENST00000385079 72 ntBASIC-1.43□□□□□ -2.64
CLDN12P56749 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.43□□□□□ -2.64
CLDN12P56749 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.43□□□□□ -2.64
CLDN12P56749 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.44□□□□□ -2.64
CLDN12P56749 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.44□□□□□ -2.64
CLDN12P56749 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.44□□□□□ -2.64
CLDN12P56749 MIR206-201ENST00000384872 86 ntBASIC-1.44□□□□□ -2.64
CLDN12P56749 snoU83B.1-201ENST00000517136 88 ntBASIC-1.44□□□□□ -2.64
CLDN12P56749 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
CLDN12P56749 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.44□□□□□ -2.64
CLDN12P56749 AC145423.2-201ENST00000610631 239 ntBASIC-1.44□□□□□ -2.64
CLDN12P56749 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.45□□□□□ -2.64
CLDN12P56749 SNORD115-25-201ENST00000362619 82 ntBASIC-1.45□□□□□ -2.64
CLDN12P56749 MIR652-201ENST00000385278 98 ntBASIC-1.45□□□□□ -2.64
CLDN12P56749 U4.1-201ENST00000620349 87 ntBASIC-1.45□□□□□ -2.64
CLDN12P56749 SNORA49-201ENST00000386157 136 ntBASIC-1.46□□□□□ -2.64
CLDN12P56749 RNU4-69P-201ENST00000410677 143 ntBASIC-1.46□□□□□ -2.64
CLDN12P56749 AC084781.2-201ENST00000615568 161 ntBASIC-1.46□□□□□ -2.64
CLDN12P56749 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
CLDN12P56749 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.47□□□□□ -2.64
CLDN12P56749 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.47□□□□□ -2.64
CLDN12P56749 SNORA51.5-201ENST00000384126 131 ntBASIC-1.47□□□□□ -2.64
CLDN12P56749 RNU6-472P-201ENST00000384299 107 ntBASIC-1.47□□□□□ -2.64
CLDN12P56749 FGF7P6-202ENST00000451282 293 ntBASIC-1.47□□□□□ -2.64
CLDN12P56749 RNU6-706P-201ENST00000517229 104 ntBASIC-1.47□□□□□ -2.64
CLDN12P56749 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.47□□□□□ -2.64
CLDN12P56749 SNORD115-35-201ENST00000365122 82 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 Z83846.1-201ENST00000446798 265 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 RNU7-106P-201ENST00000459514 67 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 RNU6-287P-201ENST00000516230 98 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 MIR8068-201ENST00000618032 68 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 MIR198-201ENST00000637333 62 ntBASIC-1.48□□□□□ -2.65
CLDN12P56749 RNU6-103P-201ENST00000363686 107 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 RNU6-973P-201ENST00000364690 107 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 SNORD74.6-201ENST00000364796 70 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 MIR216B-201ENST00000390186 82 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 RNU6-381P-201ENST00000391259 108 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 MIR1270-201ENST00000459320 83 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 RNU6-561P-201ENST00000516222 102 ntBASIC-1.49□□□□□ -2.65
CLDN12P56749 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.5□□□□□ -2.65
CLDN12P56749 SNORD77B-201ENST00000391112 67 ntBASIC-1.5□□□□□ -2.65
CLDN12P56749 SNX3P1X-201ENST00000414887 175 ntBASIC-1.5□□□□□ -2.65
CLDN12P56749 RNU6-277P-201ENST00000516272 106 ntBASIC-1.5□□□□□ -2.65
CLDN12P56749 AL627230.5-201ENST00000619807 58 ntBASIC-1.5□□□□□ -2.65
CLDN12P56749 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 RNU6-690P-201ENST00000365242 106 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 MT-TL1-201ENST00000386347 75 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 SERF1AP1-201ENST00000514575 187 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 RNU7-2P-201ENST00000516096 62 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 RNA5SP461-201ENST00000516451 104 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 RNU2-4P-201ENST00000606190 192 ntBASIC-1.51□□□□□ -2.65
CLDN12P56749 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.52□□□□□ -2.65
CLDN12P56749 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.52□□□□□ -2.65
CLDN12P56749 RNU6-121P-201ENST00000410525 99 ntBASIC-1.52□□□□□ -2.65
CLDN12P56749 SNORD2.1-201ENST00000458762 69 ntBASIC-1.52□□□□□ -2.65
CLDN12P56749 RNU2-35P-201ENST00000516446 142 ntBASIC-1.52□□□□□ -2.65
CLDN12P56749 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.52□□□□□ -2.65
CLDN12P56749 MIR6854-201ENST00000614935 69 ntBASIC-1.52□□□□□ -2.65
CLDN12P56749 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.53□□□□□ -2.65
CLDN12P56749 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.53□□□□□ -2.65
CLDN12P56749 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.53□□□□□ -2.65
CLDN12P56749 MIR1252-201ENST00000408861 65 ntBASIC-1.53□□□□□ -2.65
CLDN12P56749 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 RNU6-905P-201ENST00000384434 107 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 RNU6-850P-201ENST00000516934 103 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 AC073869.6-201ENST00000640656 341 ntBASIC-1.54□□□□□ -2.66
CLDN12P56749 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 RNU6-476P-201ENST00000384726 107 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 RNU6-876P-201ENST00000391295 104 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 SNORD19B-201ENST00000459623 84 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 SNORA40.15-201ENST00000516884 107 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.55□□□□□ -2.66
CLDN12P56749 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.56□□□□□ -2.66
CLDN12P56749 AL121914.1-201ENST00000450188 156 ntBASIC-1.56□□□□□ -2.66
CLDN12P56749 RNA5SP236-201ENST00000516169 116 ntBASIC-1.56□□□□□ -2.66
CLDN12P56749 MIR1302-1-201ENST00000637932 143 ntBASIC-1.56□□□□□ -2.66
CLDN12P56749 AC132825.6-201ENST00000638861 357 ntBASIC-1.56□□□□□ -2.66
CLDN12P56749 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.57□□□□□ -2.66
CLDN12P56749 RNU4-17P-201ENST00000365598 141 ntBASIC-1.57□□□□□ -2.66
CLDN12P56749 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms