Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NUBP1P53384 Y_RNA.330-201ENST00000365230 109 ntBASIC2.97□□□□□ -1.93
NUBP1P53384 AC244505.6-201ENST00000452829 130 ntBASIC2.97□□□□□ -1.93
NUBP1P53384 RNU7-24P-201ENST00000458867 62 ntBASIC2.97□□□□□ -1.93
NUBP1P53384 RNU6-982P-201ENST00000516216 102 ntBASIC2.97□□□□□ -1.93
NUBP1P53384 RNA5SP68-201ENST00000363885 119 ntBASIC2.96□□□□□ -1.94
NUBP1P53384 RNU6-1065P-201ENST00000384513 106 ntBASIC2.96□□□□□ -1.94
NUBP1P53384 MIR524-201ENST00000385242 87 ntBASIC2.96□□□□□ -1.94
NUBP1P53384 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
NUBP1P53384 RNU7-13P-201ENST00000516413 62 ntBASIC2.96□□□□□ -1.94
NUBP1P53384 RNA5SP245-201ENST00000364239 121 ntBASIC2.95□□□□□ -1.94
NUBP1P53384 RNU6-1335P-201ENST00000365426 107 ntBASIC2.95□□□□□ -1.94
NUBP1P53384 SNORD23.1-201ENST00000408212 104 ntBASIC2.95□□□□□ -1.94
NUBP1P53384 AC108210.2-201ENST00000503681 201 ntBASIC2.95□□□□□ -1.94
NUBP1P53384 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
NUBP1P53384 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.94□□□□□ -1.94
NUBP1P53384 MIR4713-201ENST00000582691 75 ntBASIC2.94□□□□□ -1.94
NUBP1P53384 MIR6817-201ENST00000615588 66 ntBASIC2.94□□□□□ -1.94
NUBP1P53384 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUBP1P53384 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NUBP1P53384 SNORD111-201ENST00000408139 94 ntBASIC2.93□□□□□ -1.94
NUBP1P53384 RPS26P5-201ENST00000418544 335 ntBASIC2.93□□□□□ -1.94
NUBP1P53384 snoU13.9-201ENST00000458927 103 ntBASIC2.93□□□□□ -1.94
NUBP1P53384 AC245884.12-201ENST00000615364 59 ntBASIC2.93□□□□□ -1.94
NUBP1P53384 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
NUBP1P53384 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.92□□□□□ -1.94
NUBP1P53384 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NUBP1P53384 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.92□□□□□ -1.94
NUBP1P53384 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NUBP1P53384 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NUBP1P53384 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 RNU6-1039P-201ENST00000383931 107 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 MIR938-201ENST00000401216 83 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 SNORA3.2-201ENST00000408221 125 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 AC079140.2-201ENST00000506193 142 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 AC245166.1-201ENST00000521012 253 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 AC036111.3-201ENST00000526389 112 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 MIR6509-201ENST00000614603 85 ntBASIC2.92□□□□□ -1.94
NUBP1P53384 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUBP1P53384 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NUBP1P53384 RNA5SP21-201ENST00000410917 96 ntBASIC2.91□□□□□ -1.94
NUBP1P53384 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.91□□□□□ -1.94
NUBP1P53384 MIR3920-201ENST00000581751 86 ntBASIC2.91□□□□□ -1.94
NUBP1P53384 MIR4676-201ENST00000583078 72 ntBASIC2.91□□□□□ -1.94
NUBP1P53384 AC073869.9-201ENST00000641610 120 ntBASIC2.91□□□□□ -1.94
NUBP1P53384 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NUBP1P53384 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.94
NUBP1P53384 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
NUBP1P53384 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.95
NUBP1P53384 RNU6-940P-201ENST00000363433 104 ntBASIC2.9□□□□□ -1.95
NUBP1P53384 Y_RNA.375-201ENST00000365625 101 ntBASIC2.9□□□□□ -1.95
NUBP1P53384 RNA5SP425-201ENST00000410336 112 ntBASIC2.9□□□□□ -1.95
NUBP1P53384 RNU6-548P-201ENST00000517083 115 ntBASIC2.9□□□□□ -1.95
NUBP1P53384 AC092634.7-201ENST00000621022 103 ntBASIC2.9□□□□□ -1.95
NUBP1P53384 AC027335.2-201ENST00000624030 375 ntBASIC2.9□□□□□ -1.95
NUBP1P53384 MIR30E-201ENST00000362104 92 ntBASIC2.89□□□□□ -1.95
NUBP1P53384 RNU6-495P-201ENST00000362995 107 ntBASIC2.89□□□□□ -1.95
NUBP1P53384 MIR4648-201ENST00000580107 72 ntBASIC2.89□□□□□ -1.95
NUBP1P53384 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NUBP1P53384 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUBP1P53384 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.88□□□□□ -1.95
NUBP1P53384 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.88□□□□□ -1.95
NUBP1P53384 RNU6-829P-201ENST00000363700 112 ntBASIC2.88□□□□□ -1.95
NUBP1P53384 SNORA25.5-201ENST00000363782 126 ntBASIC2.88□□□□□ -1.95
NUBP1P53384 MIR3937-201ENST00000580135 106 ntBASIC2.88□□□□□ -1.95
NUBP1P53384 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.88□□□□□ -1.95
NUBP1P53384 AC073476.4-201ENST00000628409 72 ntBASIC2.88□□□□□ -1.95
NUBP1P53384 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.87□□□□□ -1.95
NUBP1P53384 Y_RNA.236-201ENST00000364427 111 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 AL359511.1-201ENST00000402970 211 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 AL591806.2-201ENST00000433122 173 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 RNA5SP148-201ENST00000516527 94 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 AC019176.1-201ENST00000518519 225 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 MIR4287-201ENST00000579398 78 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 MIR466-201ENST00000580653 84 ntBASIC2.87□□□□□ -1.95
NUBP1P53384 SNORD1A-201ENST00000364968 72 ntBASIC2.86□□□□□ -1.95
NUBP1P53384 SNORA44.1-201ENST00000517031 108 ntBASIC2.86□□□□□ -1.95
NUBP1P53384 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NUBP1P53384 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NUBP1P53384 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NUBP1P53384 RNU7-102P-201ENST00000458948 62 ntBASIC2.85□□□□□ -1.95
NUBP1P53384 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.85□□□□□ -1.95
NUBP1P53384 AC106800.4-201ENST00000614905 153 ntBASIC2.85□□□□□ -1.95
NUBP1P53384 AC080100.1-201ENST00000624239 5356 ntBASIC2.85□□□□□ -1.95
NUBP1P53384 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NUBP1P53384 SUMO1P4-201ENST00000429430 302 ntBASIC2.84□□□□□ -1.95
NUBP1P53384 AL356320.1-201ENST00000429616 163 ntBASIC2.84□□□□□ -1.95
NUBP1P53384 RNU6-1079P-201ENST00000362861 110 ntBASIC2.83□□□□□ -1.96
NUBP1P53384 RNU6-1126P-201ENST00000384002 107 ntBASIC2.83□□□□□ -1.96
NUBP1P53384 RNA5SP458-201ENST00000516188 119 ntBASIC2.83□□□□□ -1.96
NUBP1P53384 RNU7-40P-201ENST00000516397 64 ntBASIC2.83□□□□□ -1.96
NUBP1P53384 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NUBP1P53384 MIR302D-201ENST00000362275 68 ntBASIC2.82□□□□□ -1.96
NUBP1P53384 Y_RNA.174-201ENST00000363781 105 ntBASIC2.82□□□□□ -1.96
NUBP1P53384 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.82□□□□□ -1.96
NUBP1P53384 RNA5SP274-201ENST00000410484 108 ntBASIC2.82□□□□□ -1.96
NUBP1P53384 RPL23AP42-201ENST00000471152 471 ntBASIC2.82□□□□□ -1.96
NUBP1P53384 SNORA64.4-201ENST00000516632 81 ntBASIC2.82□□□□□ -1.96
NUBP1P53384 NAMPTP3-201ENST00000569273 224 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms