Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.12□□□□□ -2.07
CD97P48960 SNORD115-22-201ENST00000364456 82 ntBASIC2.11□□□□□ -2.07
CD97P48960 SNORA64-201ENST00000384674 134 ntBASIC2.11□□□□□ -2.07
CD97P48960 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
CD97P48960 AL606490.4-201ENST00000423117 127 ntBASIC2.11□□□□□ -2.07
CD97P48960 AC079150.2-201ENST00000443733 78 ntBASIC2.11□□□□□ -2.07
CD97P48960 RNU6-322P-201ENST00000516010 103 ntBASIC2.11□□□□□ -2.07
CD97P48960 SNORD111.1-201ENST00000516421 86 ntBASIC2.11□□□□□ -2.07
CD97P48960 MIR3140-201ENST00000583685 90 ntBASIC2.11□□□□□ -2.07
CD97P48960 MIR219B-201ENST00000637023 88 ntBASIC2.11□□□□□ -2.07
CD97P48960 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CD97P48960 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CD97P48960 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CD97P48960 RNU4-58P-201ENST00000363192 141 ntBASIC2.1□□□□□ -2.07
CD97P48960 RNU6-53P-201ENST00000365367 106 ntBASIC2.1□□□□□ -2.07
CD97P48960 SNORD116-24-201ENST00000384549 92 ntBASIC2.1□□□□□ -2.07
CD97P48960 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CD97P48960 U8.13-201ENST00000390842 128 ntBASIC2.1□□□□□ -2.07
CD97P48960 MIR1287-201ENST00000408492 90 ntBASIC2.1□□□□□ -2.07
CD97P48960 Y_RNA.606-201ENST00000410579 103 ntBASIC2.1□□□□□ -2.07
CD97P48960 RPS27P16-201ENST00000425758 201 ntBASIC2.1□□□□□ -2.07
CD97P48960 RNU7-195P-201ENST00000458793 62 ntBASIC2.1□□□□□ -2.07
CD97P48960 SNORA25.16-201ENST00000516741 121 ntBASIC2.1□□□□□ -2.07
CD97P48960 RNU11-2P-201ENST00000516898 142 ntBASIC2.1□□□□□ -2.07
CD97P48960 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
CD97P48960 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
CD97P48960 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
CD97P48960 AL627230.6-201ENST00000611129 280 ntBASIC2.1□□□□□ -2.07
CD97P48960 TRDV1-202ENST00000621643 102 ntBASIC2.1□□□□□ -2.07
CD97P48960 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CD97P48960 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CD97P48960 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
CD97P48960 RNU6-1216P-201ENST00000362590 107 ntBASIC2.09□□□□□ -2.07
CD97P48960 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
CD97P48960 MIR653-201ENST00000385279 96 ntBASIC2.09□□□□□ -2.07
CD97P48960 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CD97P48960 RNU6-1053P-201ENST00000515930 101 ntBASIC2.09□□□□□ -2.07
CD97P48960 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
CD97P48960 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
CD97P48960 MIR4264-201ENST00000583520 66 ntBASIC2.09□□□□□ -2.07
CD97P48960 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CD97P48960 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
CD97P48960 RNU6-396P-201ENST00000365369 105 ntBASIC2.08□□□□□ -2.08
CD97P48960 MT-TF-201ENST00000387314 71 ntBASIC2.08□□□□□ -2.08
CD97P48960 RNU6-604P-201ENST00000390917 100 ntBASIC2.08□□□□□ -2.08
CD97P48960 MIR1302-7-201ENST00000408841 72 ntBASIC2.08□□□□□ -2.08
CD97P48960 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
CD97P48960 AC110620.1-201ENST00000416042 228 ntBASIC2.08□□□□□ -2.08
CD97P48960 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CD97P48960 RNU7-62P-201ENST00000458856 62 ntBASIC2.08□□□□□ -2.08
CD97P48960 TRAJ51-201ENST00000504127 63 ntBASIC2.08□□□□□ -2.08
CD97P48960 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
CD97P48960 MIR4529-201ENST00000578110 78 ntBASIC2.08□□□□□ -2.08
CD97P48960 MIR4491-201ENST00000581087 68 ntBASIC2.08□□□□□ -2.08
CD97P48960 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CD97P48960 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CD97P48960 RNU6-664P-201ENST00000362381 107 ntBASIC2.07□□□□□ -2.08
CD97P48960 SNORD113.1-201ENST00000363280 73 ntBASIC2.07□□□□□ -2.08
CD97P48960 RNU6-669P-201ENST00000365575 107 ntBASIC2.07□□□□□ -2.08
CD97P48960 SNORD101-201ENST00000384027 73 ntBASIC2.07□□□□□ -2.08
CD97P48960 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
CD97P48960 SNORD23.1-201ENST00000408212 104 ntBASIC2.07□□□□□ -2.08
CD97P48960 SNORD100-201ENST00000408573 76 ntBASIC2.07□□□□□ -2.08
CD97P48960 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.07□□□□□ -2.08
CD97P48960 MIR3192-201ENST00000584920 77 ntBASIC2.07□□□□□ -2.08
CD97P48960 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.07□□□□□ -2.08
CD97P48960 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CD97P48960 U6.81-201ENST00000612550 106 ntBASIC2.07□□□□□ -2.08
CD97P48960 uc_338.6-201ENST00000613544 171 ntBASIC2.07□□□□□ -2.08
CD97P48960 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.07□□□□□ -2.08
CD97P48960 RNU6-824P-201ENST00000363724 104 ntBASIC2.06□□□□□ -2.08
CD97P48960 RNU6-203P-201ENST00000384038 104 ntBASIC2.06□□□□□ -2.08
CD97P48960 Y_RNA.536-201ENST00000384621 113 ntBASIC2.06□□□□□ -2.08
CD97P48960 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CD97P48960 AC097510.1-201ENST00000510945 133 ntBASIC2.06□□□□□ -2.08
CD97P48960 RNU6-977P-201ENST00000516411 103 ntBASIC2.06□□□□□ -2.08
CD97P48960 MIR4696-201ENST00000581431 70 ntBASIC2.06□□□□□ -2.08
CD97P48960 U1.36-201ENST00000620684 176 ntBASIC2.06□□□□□ -2.08
CD97P48960 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD97P48960 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CD97P48960 MIR101-2-201ENST00000362195 79 ntBASIC2.05□□□□□ -2.08
CD97P48960 SNORA25.3-201ENST00000363205 127 ntBASIC2.05□□□□□ -2.08
CD97P48960 Y_RNA.588-201ENST00000391254 102 ntBASIC2.05□□□□□ -2.08
CD97P48960 Y_RNA.809-201ENST00000516058 95 ntBASIC2.05□□□□□ -2.08
CD97P48960 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.05□□□□□ -2.08
CD97P48960 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CD97P48960 U6.100-201ENST00000636230 99 ntBASIC2.05□□□□□ -2.08
CD97P48960 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CD97P48960 SNORD93-201ENST00000408813 74 ntBASIC2.04□□□□□ -2.08
CD97P48960 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
CD97P48960 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
CD97P48960 RN7SL274P-201ENST00000492268 272 ntBASIC2.04□□□□□ -2.08
CD97P48960 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
CD97P48960 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
CD97P48960 SNORA31.17-201ENST00000516953 127 ntBASIC2.04□□□□□ -2.08
CD97P48960 MIR4781-201ENST00000585250 76 ntBASIC2.04□□□□□ -2.08
CD97P48960 AL109933.3-201ENST00000619095 188 ntBASIC2.04□□□□□ -2.08
CD97P48960 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
CD97P48960 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
CD97P48960 RNU6-403P-201ENST00000363163 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms