Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 Y_RNA.42-201ENST00000362660 108 ntBASIC0.92□□□□□ -2.26
RFX2P48378 Y_RNA.95-201ENST00000363079 95 ntBASIC0.92□□□□□ -2.26
RFX2P48378 Y_RNA.107-201ENST00000363190 121 ntBASIC0.92□□□□□ -2.26
RFX2P48378 RNU6-1163P-201ENST00000364516 107 ntBASIC0.92□□□□□ -2.26
RFX2P48378 Y_RNA.348-201ENST00000365403 103 ntBASIC0.92□□□□□ -2.26
RFX2P48378 RNU1-119P-201ENST00000391122 165 ntBASIC0.92□□□□□ -2.26
RFX2P48378 FABP5P4-201ENST00000437203 171 ntBASIC0.92□□□□□ -2.26
RFX2P48378 RNU6-86P-201ENST00000606534 107 ntBASIC0.92□□□□□ -2.26
RFX2P48378 RMST_2.1-201ENST00000617263 136 ntBASIC0.92□□□□□ -2.26
RFX2P48378 RNU1-124P-201ENST00000363861 145 ntBASIC0.91□□□□□ -2.26
RFX2P48378 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
RFX2P48378 RNU6-1335P-201ENST00000365426 107 ntBASIC0.91□□□□□ -2.26
RFX2P48378 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
RFX2P48378 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.91□□□□□ -2.26
RFX2P48378 MIR4777-201ENST00000583710 86 ntBASIC0.91□□□□□ -2.26
RFX2P48378 MIR6715A-201ENST00000615929 79 ntBASIC0.91□□□□□ -2.26
RFX2P48378 MIR101-2-201ENST00000362195 79 ntBASIC0.9□□□□□ -2.27
RFX2P48378 Y_RNA.567-201ENST00000384736 106 ntBASIC0.9□□□□□ -2.27
RFX2P48378 RNU6-644P-201ENST00000391155 98 ntBASIC0.9□□□□□ -2.27
RFX2P48378 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.9□□□□□ -2.27
RFX2P48378 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
RFX2P48378 RNU6-1194P-201ENST00000516208 104 ntBASIC0.9□□□□□ -2.27
RFX2P48378 SNORA40.13-201ENST00000516379 120 ntBASIC0.9□□□□□ -2.27
RFX2P48378 Y_RNA.697-201ENST00000516776 113 ntBASIC0.9□□□□□ -2.27
RFX2P48378 RNU6-765P-201ENST00000516916 99 ntBASIC0.9□□□□□ -2.27
RFX2P48378 RNU6-850P-201ENST00000516934 103 ntBASIC0.9□□□□□ -2.27
RFX2P48378 MIR4524B-201ENST00000581569 115 ntBASIC0.9□□□□□ -2.27
RFX2P48378 Y_RNA.93-201ENST00000363066 109 ntBASIC0.89□□□□□ -2.27
RFX2P48378 RNU6-640P-201ENST00000363693 105 ntBASIC0.89□□□□□ -2.27
RFX2P48378 SNORA7.1-201ENST00000363750 139 ntBASIC0.89□□□□□ -2.27
RFX2P48378 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
RFX2P48378 RNU6-905P-201ENST00000384434 107 ntBASIC0.89□□□□□ -2.27
RFX2P48378 MIR520H-201ENST00000385126 88 ntBASIC0.89□□□□□ -2.27
RFX2P48378 MIR764-201ENST00000390811 85 ntBASIC0.89□□□□□ -2.27
RFX2P48378 RNU6-482P-201ENST00000391068 107 ntBASIC0.89□□□□□ -2.27
RFX2P48378 SNRPGP12-201ENST00000449481 213 ntBASIC0.89□□□□□ -2.27
RFX2P48378 U7.7-201ENST00000459276 60 ntBASIC0.89□□□□□ -2.27
RFX2P48378 RNU7-61P-201ENST00000515897 61 ntBASIC0.89□□□□□ -2.27
RFX2P48378 RNU6-1110P-201ENST00000516462 101 ntBASIC0.89□□□□□ -2.27
RFX2P48378 Y_RNA.173-201ENST00000363776 113 ntBASIC0.88□□□□□ -2.27
RFX2P48378 Y_RNA.466-201ENST00000384294 113 ntBASIC0.88□□□□□ -2.27
RFX2P48378 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
RFX2P48378 MTATP8P2-201ENST00000435212 202 ntBASIC0.88□□□□□ -2.27
RFX2P48378 MIR4298-201ENST00000584380 73 ntBASIC0.88□□□□□ -2.27
RFX2P48378 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
RFX2P48378 AL136317.1-201ENST00000612653 226 ntBASIC0.88□□□□□ -2.27
RFX2P48378 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
RFX2P48378 MIR378A-201ENST00000362177 66 ntBASIC0.87□□□□□ -2.27
RFX2P48378 RNU6-1244P-201ENST00000363614 108 ntBASIC0.87□□□□□ -2.27
RFX2P48378 RNU6-571P-201ENST00000384128 107 ntBASIC0.87□□□□□ -2.27
RFX2P48378 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
RFX2P48378 RNU4-62P-201ENST00000410125 130 ntBASIC0.87□□□□□ -2.27
RFX2P48378 MIR4439-201ENST00000583746 80 ntBASIC0.87□□□□□ -2.27
RFX2P48378 Y_RNA.57-201ENST00000362806 113 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNU6-813P-201ENST00000384691 107 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNU6-535P-201ENST00000384722 107 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNU6-162P-201ENST00000516228 103 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNU6-158P-201ENST00000517104 100 ntBASIC0.86□□□□□ -2.27
RFX2P48378 AC103810.7-201ENST00000607821 91 ntBASIC0.86□□□□□ -2.27
RFX2P48378 AL353770.2-201ENST00000620024 78 ntBASIC0.86□□□□□ -2.27
RFX2P48378 RNA5SP99-201ENST00000364020 114 ntBASIC0.85□□□□□ -2.27
RFX2P48378 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
RFX2P48378 MIR181B2-201ENST00000385004 89 ntBASIC0.85□□□□□ -2.27
RFX2P48378 SNORA17.3-201ENST00000391159 129 ntBASIC0.85□□□□□ -2.27
RFX2P48378 RNY4P30-201ENST00000410216 95 ntBASIC0.85□□□□□ -2.27
RFX2P48378 AC108667.1-201ENST00000428618 249 ntBASIC0.85□□□□□ -2.27
RFX2P48378 RNU7-95P-201ENST00000459222 64 ntBASIC0.85□□□□□ -2.27
RFX2P48378 TRAJ51-201ENST00000504127 63 ntBASIC0.85□□□□□ -2.27
RFX2P48378 Y_RNA.705-201ENST00000516862 110 ntBASIC0.85□□□□□ -2.27
RFX2P48378 RNU6-448P-201ENST00000517052 107 ntBASIC0.85□□□□□ -2.27
RFX2P48378 MIR6078-201ENST00000611069 100 ntBASIC0.85□□□□□ -2.27
RFX2P48378 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.85□□□□□ -2.27
RFX2P48378 U7.3-201ENST00000616123 62 ntBASIC0.85□□□□□ -2.27
RFX2P48378 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.85□□□□□ -2.27
RFX2P48378 Y_RNA.56-201ENST00000362798 112 ntBASIC0.84□□□□□ -2.27
RFX2P48378 RNA5SP245-201ENST00000364239 121 ntBASIC0.84□□□□□ -2.27
RFX2P48378 Y_RNA.342-201ENST00000365352 113 ntBASIC0.84□□□□□ -2.27
RFX2P48378 MIR488-201ENST00000365739 83 ntBASIC0.84□□□□□ -2.27
RFX2P48378 MIR635-201ENST00000384830 98 ntBASIC0.84□□□□□ -2.27
RFX2P48378 MIR516A2-201ENST00000384888 90 ntBASIC0.84□□□□□ -2.27
RFX2P48378 MIR516A1-201ENST00000385033 90 ntBASIC0.84□□□□□ -2.27
RFX2P48378 SNORD63B-201ENST00000411005 70 ntBASIC0.84□□□□□ -2.27
RFX2P48378 MIR548H5-201ENST00000580314 60 ntBASIC0.84□□□□□ -2.27
RFX2P48378 MIR2052-201ENST00000636055 55 ntBASIC0.84□□□□□ -2.27
RFX2P48378 Y_RNA.32-201ENST00000362589 110 ntBASIC0.83□□□□□ -2.28
RFX2P48378 RNU6-1125P-201ENST00000363601 107 ntBASIC0.83□□□□□ -2.28
RFX2P48378 RNU6-480P-201ENST00000384332 107 ntBASIC0.83□□□□□ -2.28
RFX2P48378 RNU6-887P-201ENST00000410660 100 ntBASIC0.83□□□□□ -2.28
RFX2P48378 BTF3P4-201ENST00000418852 495 ntBASIC0.83□□□□□ -2.28
RFX2P48378 AC092628.1-201ENST00000436250 252 ntBASIC0.83□□□□□ -2.28
RFX2P48378 RNU7-106P-201ENST00000459514 67 ntBASIC0.83□□□□□ -2.28
RFX2P48378 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
RFX2P48378 AP003327.1-201ENST00000529684 127 ntBASIC0.83□□□□□ -2.28
RFX2P48378 AC025521.1-201ENST00000621624 286 ntBASIC0.83□□□□□ -2.28
RFX2P48378 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RFX2P48378 RNU6-1298P-201ENST00000362456 101 ntBASIC0.82□□□□□ -2.28
RFX2P48378 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
RFX2P48378 Y_RNA.290-201ENST00000364879 114 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms