Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
HNF4AP41235 MIR4500-201ENST00000579472 76 ntBASIC0.61□□□□□ -2.31
HNF4AP41235 MIR3612-201ENST00000579753 87 ntBASIC0.61□□□□□ -2.31
HNF4AP41235 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
HNF4AP41235 U2.22-201ENST00000636441 106 ntBASIC0.61□□□□□ -2.31
HNF4AP41235 RNU4-58P-201ENST00000363192 141 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 SNORA63.5-201ENST00000363548 123 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNU6-865P-201ENST00000364772 107 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNU6-816P-201ENST00000390914 107 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNU6-1268P-201ENST00000391214 107 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNU6-1239P-201ENST00000391310 107 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNU2-51P-201ENST00000410708 197 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNA5SP247-201ENST00000411181 105 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 RNU6-313P-201ENST00000516317 112 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 AL162726.3-218ENST00000636401 95 ntBASIC0.6□□□□□ -2.31
HNF4AP41235 Y_RNA.85-201ENST00000363014 111 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 Y_RNA.155-201ENST00000363632 101 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 Y_RNA.360-201ENST00000365512 102 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 RNU6-1144P-201ENST00000384247 104 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 RNU6-429P-201ENST00000384582 108 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 Y_RNA.536-201ENST00000384621 113 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 RNU6-291P-201ENST00000384720 107 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 Y_RNA.697-201ENST00000516776 113 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.59□□□□□ -2.31
HNF4AP41235 AP001362.1-201ENST00000625165 124 ntBASIC0.59□□□□□ -2.31
HNF4AP41235 MIR18A-201ENST00000362310 71 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 Y_RNA.35-201ENST00000362601 101 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 Y_RNA.116-201ENST00000363292 103 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 RNA5SP245-201ENST00000364239 121 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 RNU6-409P-201ENST00000384114 104 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 Y_RNA.507-201ENST00000384500 99 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 SNORD116-21-201ENST00000384507 92 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 RNU6-1194P-201ENST00000516208 104 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 uc_338.16-201ENST00000621804 95 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 AL512310.12-203ENST00000640543 90 ntBASIC0.58□□□□□ -2.32
HNF4AP41235 Y_RNA.247-201ENST00000364500 92 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 RNY1P8-201ENST00000383970 114 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 RNU6-535P-201ENST00000384722 107 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 RNU6-476P-201ENST00000384726 107 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 MIR1912-201ENST00000410389 80 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 RNU6-1064P-201ENST00000410626 104 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 BX276092.1-201ENST00000427368 251 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 SNORA31.14-201ENST00000516728 116 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 RNU6-1006P-201ENST00000516998 103 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 AC068339.1-201ENST00000526965 141 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 MIR6734-201ENST00000621166 68 ntBASIC0.57□□□□□ -2.32
HNF4AP41235 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.57□□□□□ -2.32
HNF4AP41235 Y_RNA.32-201ENST00000362589 110 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 RNU6-1313P-201ENST00000362622 102 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 Y_RNA.281-201ENST00000364774 94 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 U8.6-201ENST00000364939 135 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 Y_RNA.309-201ENST00000365046 111 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 RNA5SP117-201ENST00000365294 118 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 MIR644A-201ENST00000385262 94 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 RNU6-1018P-201ENST00000516577 106 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 MIR5000-201ENST00000577717 103 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 MIR6129-201ENST00000616087 109 ntBASIC0.56□□□□□ -2.32
HNF4AP41235 MIR101-2-201ENST00000362195 79 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 Y_RNA.56-201ENST00000362798 112 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 RNU6-880P-201ENST00000384526 107 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 MIR548I2-201ENST00000408348 149 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 RNA5SP220-201ENST00000516298 104 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 MIR3678-201ENST00000578455 94 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 MIR5009-201ENST00000578736 100 ntBASIC0.55□□□□□ -2.32
HNF4AP41235 SNORA36.2-201ENST00000384004 127 ntBASIC0.54□□□□□ -2.32
HNF4AP41235 RNU6-1201P-201ENST00000384227 107 ntBASIC0.54□□□□□ -2.32
HNF4AP41235 MIR577-201ENST00000385196 96 ntBASIC0.54□□□□□ -2.32
HNF4AP41235 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.54□□□□□ -2.32
HNF4AP41235 RNU6-1223P-201ENST00000517124 104 ntBASIC0.54□□□□□ -2.32
HNF4AP41235 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.54□□□□□ -2.32
HNF4AP41235 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.54□□□□□ -2.32
HNF4AP41235 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
HNF4AP41235 RNU6-834P-201ENST00000362367 110 ntBASIC0.53□□□□□ -2.32
HNF4AP41235 RNU6-1290P-201ENST00000362957 109 ntBASIC0.53□□□□□ -2.32
HNF4AP41235 RNU6-1056P-201ENST00000383996 107 ntBASIC0.53□□□□□ -2.32
HNF4AP41235 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.53□□□□□ -2.32
HNF4AP41235 TRAJ51-201ENST00000504127 63 ntBASIC0.53□□□□□ -2.32
HNF4AP41235 MIR3613-201ENST00000579844 87 ntBASIC0.53□□□□□ -2.32
HNF4AP41235 AL442128.1-201ENST00000615151 90 ntBASIC0.53□□□□□ -2.32
HNF4AP41235 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
HNF4AP41235 RNU6-1099P-201ENST00000363533 107 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 Y_RNA.174-201ENST00000363781 105 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 RNU6-1107P-201ENST00000364817 104 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 Y_RNA.323-201ENST00000365157 109 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 RNU6-1014P-201ENST00000383940 103 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 RNU6-1081P-201ENST00000384537 107 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.52□□□□□ -2.33
HNF4AP41235 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.52□□□□□ -2.33
HNF4AP41235 Y_RNA.49-201ENST00000362714 112 ntBASIC0.51□□□□□ -2.33
HNF4AP41235 SNORD38.1-201ENST00000363863 68 ntBASIC0.51□□□□□ -2.33
HNF4AP41235 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms