Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR548S-201ENST00000581352 82 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 AC069503.3-201ENST00000618674 145 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 uc_338.10-201ENST00000621872 182 ntBASIC-0.78□□□□□ -2.53
RFC3P40938 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 MIR206-201ENST00000384872 86 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 RNU4-69P-201ENST00000410677 143 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 AC022028.1-201ENST00000412054 408 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
RFC3P40938 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 AP001362.1-201ENST00000625165 124 ntBASIC-0.79□□□□□ -2.54
RFC3P40938 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.79□□□□□ -2.54
RFC3P40938 RNU6-170P-201ENST00000362832 104 ntBASIC-0.8□□□□□ -2.54
RFC3P40938 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.8□□□□□ -2.54
RFC3P40938 RNA5SP66-201ENST00000517178 101 ntBASIC-0.8□□□□□ -2.54
RFC3P40938 IGKV1-22-201ENST00000524313 326 ntBASIC-0.8□□□□□ -2.54
RFC3P40938 MIR548AX-201ENST00000580117 73 ntBASIC-0.8□□□□□ -2.54
RFC3P40938 MTND4P29-201ENST00000503122 1372 ntBASIC-0.81□□□□□ -2.54
RFC3P40938 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.81□□□□□ -2.54
RFC3P40938 RNU6-524P-201ENST00000384270 107 ntBASIC-0.81□□□□□ -2.54
RFC3P40938 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.81□□□□□ -2.54
RFC3P40938 AC134503.1-201ENST00000633048 54 ntBASIC-0.81□□□□□ -2.54
RFC3P40938 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.82□□□□□ -2.54
RFC3P40938 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.82□□□□□ -2.54
RFC3P40938 AC093423.1-201ENST00000440817 142 ntBASIC-0.82□□□□□ -2.54
RFC3P40938 SCARNA17-201ENST00000516183 144 ntBASIC-0.82□□□□□ -2.54
RFC3P40938 RNA5SP169-201ENST00000517268 117 ntBASIC-0.82□□□□□ -2.54
RFC3P40938 SNORD114-29-201ENST00000364819 70 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 RNU6-455P-201ENST00000384681 107 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 MIR617-201ENST00000385030 97 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 SNORD83B-201ENST00000386745 93 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 AC138907.4-201ENST00000570107 226 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 YWHAEP2-201ENST00000580066 112 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 AC021443.1-201ENST00000604478 211 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 AL160413.1-201ENST00000622780 310 ntBASIC-0.83□□□□□ -2.54
RFC3P40938 SNORD115-44-201ENST00000365391 82 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 RNU6-47P-201ENST00000383866 107 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 RNU6-571P-201ENST00000384128 107 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 MIR519E-201ENST00000385075 84 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 SNORD77B-201ENST00000391112 67 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.84□□□□□ -2.54
RFC3P40938 MTATP6P23-201ENST00000440153 476 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 SPINT5P-201ENST00000448174 155 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.84□□□□□ -2.54
RFC3P40938 RNU7-164P-201ENST00000459221 62 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 RNU6-240P-201ENST00000516098 97 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 MIR548AG2-201ENST00000581228 64 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 RNU2-4P-201ENST00000606190 192 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 AC093726.3-201ENST00000637588 150 ntBASIC-0.84□□□□□ -2.54
RFC3P40938 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.85□□□□□ -2.55
RFC3P40938 RNU6-472P-201ENST00000384299 107 ntBASIC-0.85□□□□□ -2.55
RFC3P40938 MIR548P-201ENST00000408336 84 ntBASIC-0.85□□□□□ -2.55
RFC3P40938 RNU7-2P-201ENST00000516096 62 ntBASIC-0.85□□□□□ -2.55
RFC3P40938 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.86□□□□□ -2.55
RFC3P40938 RNY3P14-201ENST00000384309 102 ntBASIC-0.86□□□□□ -2.55
RFC3P40938 RNU6-713P-201ENST00000384761 107 ntBASIC-0.86□□□□□ -2.55
RFC3P40938 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.86□□□□□ -2.55
RFC3P40938 MIR4643-201ENST00000577473 78 ntBASIC-0.86□□□□□ -2.55
RFC3P40938 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 AL445193.1-201ENST00000441183 141 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 RNU7-106P-201ENST00000459514 67 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 RNU7-123P-201ENST00000515911 60 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 RNU6-175P-201ENST00000516896 107 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 MIR548AE1-201ENST00000583292 70 ntBASIC-0.87□□□□□ -2.55
RFC3P40938 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 RNU6-275P-201ENST00000364910 107 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 MIR539-201ENST00000365690 78 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 MIR204-201ENST00000385200 110 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 RNU6-985P-201ENST00000410182 104 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 MTATP6P21-201ENST00000440681 189 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 RNY3P16-201ENST00000516338 101 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 MIR4460-201ENST00000577862 86 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 MIR4324-201ENST00000584846 72 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 AC009779.6-201ENST00000603972 165 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 U6.104-201ENST00000637979 90 ntBASIC-0.88□□□□□ -2.55
RFC3P40938 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.89□□□□□ -2.55
RFC3P40938 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.89□□□□□ -2.55
RFC3P40938 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.89□□□□□ -2.55
RFC3P40938 MIR376B-201ENST00000614515 100 ntBASIC-0.89□□□□□ -2.55
RFC3P40938 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 SNORD115-35-201ENST00000365122 82 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.9□□□□□ -2.55
RFC3P40938 RNU6-154P-201ENST00000384306 106 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms