Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC008163.1-202ENST00000636004 2889 ntBASIC1.52□□□□□ -2.17
LTBRP36941 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LTBRP36941 Y_RNA.119-201ENST00000363301 96 ntBASIC1.51□□□□□ -2.17
LTBRP36941 Y_RNA.178-201ENST00000363832 102 ntBASIC1.51□□□□□ -2.17
LTBRP36941 Y_RNA.205-201ENST00000364128 113 ntBASIC1.51□□□□□ -2.17
LTBRP36941 RNU6-1131P-201ENST00000364955 107 ntBASIC1.51□□□□□ -2.17
LTBRP36941 RNU1-36P-201ENST00000365130 165 ntBASIC1.51□□□□□ -2.17
LTBRP36941 MIR488-201ENST00000365739 83 ntBASIC1.51□□□□□ -2.17
LTBRP36941 MIR222-201ENST00000384992 110 ntBASIC1.51□□□□□ -2.17
LTBRP36941 MIR1257-201ENST00000408490 117 ntBASIC1.51□□□□□ -2.17
LTBRP36941 AC015818.7-201ENST00000428754 109 ntBASIC1.51□□□□□ -2.17
LTBRP36941 AC087499.7-201ENST00000441958 109 ntBASIC1.51□□□□□ -2.17
LTBRP36941 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.51□□□□□ -2.17
LTBRP36941 MIR4500-201ENST00000579472 76 ntBASIC1.51□□□□□ -2.17
LTBRP36941 MIR4491-201ENST00000581087 68 ntBASIC1.51□□□□□ -2.17
LTBRP36941 RNU6-1163P-201ENST00000364516 107 ntBASIC1.5□□□□□ -2.17
LTBRP36941 SNORA72.6-201ENST00000384520 129 ntBASIC1.5□□□□□ -2.17
LTBRP36941 MIR4771-2-201ENST00000577758 74 ntBASIC1.5□□□□□ -2.17
LTBRP36941 MIR4771-1-201ENST00000582617 74 ntBASIC1.5□□□□□ -2.17
LTBRP36941 MIR6078-201ENST00000611069 100 ntBASIC1.5□□□□□ -2.17
LTBRP36941 Y_RNA.96-201ENST00000363092 109 ntBASIC1.49□□□□□ -2.17
LTBRP36941 RNU6-403P-201ENST00000363163 104 ntBASIC1.49□□□□□ -2.17
LTBRP36941 Y_RNA.342-201ENST00000365352 113 ntBASIC1.49□□□□□ -2.17
LTBRP36941 MIR520E-201ENST00000384867 87 ntBASIC1.49□□□□□ -2.17
LTBRP36941 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
LTBRP36941 RNU6-994P-201ENST00000410507 111 ntBASIC1.49□□□□□ -2.17
LTBRP36941 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.49□□□□□ -2.17
LTBRP36941 Y_RNA.705-201ENST00000516862 110 ntBASIC1.49□□□□□ -2.17
LTBRP36941 RNU6-86P-201ENST00000606534 107 ntBASIC1.49□□□□□ -2.17
LTBRP36941 MALAT1.1-201ENST00000618249 95 ntBASIC1.49□□□□□ -2.17
LTBRP36941 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LTBRP36941 HSBP1P2-201ENST00000299671 229 ntBASIC1.48□□□□□ -2.17
LTBRP36941 RNA5SP327-201ENST00000362494 101 ntBASIC1.48□□□□□ -2.17
LTBRP36941 Y_RNA.567-201ENST00000384736 106 ntBASIC1.48□□□□□ -2.17
LTBRP36941 MIR598-201ENST00000384868 97 ntBASIC1.48□□□□□ -2.17
LTBRP36941 Y_RNA.588-201ENST00000391254 102 ntBASIC1.48□□□□□ -2.17
LTBRP36941 RNU4-83P-201ENST00000410863 133 ntBASIC1.48□□□□□ -2.17
LTBRP36941 RNU7-40P-201ENST00000516397 64 ntBASIC1.48□□□□□ -2.17
LTBRP36941 SNORA25.16-201ENST00000516741 121 ntBASIC1.48□□□□□ -2.17
LTBRP36941 MIR3122-201ENST00000577243 73 ntBASIC1.48□□□□□ -2.17
LTBRP36941 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.48□□□□□ -2.17
LTBRP36941 Y_RNA.220-201ENST00000364244 109 ntBASIC1.47□□□□□ -2.17
LTBRP36941 Y_RNA.369-201ENST00000365568 117 ntBASIC1.47□□□□□ -2.17
LTBRP36941 RNU6-49P-201ENST00000384256 107 ntBASIC1.47□□□□□ -2.17
LTBRP36941 RNU6-813P-201ENST00000384691 107 ntBASIC1.47□□□□□ -2.17
LTBRP36941 SNORD12-201ENST00000391002 90 ntBASIC1.47□□□□□ -2.17
LTBRP36941 AC006254.2-201ENST00000603259 279 ntBASIC1.47□□□□□ -2.17
LTBRP36941 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LTBRP36941 SNORA25-201ENST00000384384 134 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RNY1P7-201ENST00000384743 110 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RNU6-972P-201ENST00000391208 107 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RPS26P5-201ENST00000418544 335 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RPS29P1-201ENST00000465274 159 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RNU6-162P-201ENST00000516228 103 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RNU6-531P-201ENST00000516694 104 ntBASIC1.46□□□□□ -2.18
LTBRP36941 U7.3-201ENST00000616123 62 ntBASIC1.46□□□□□ -2.18
LTBRP36941 RNU4-58P-201ENST00000363192 141 ntBASIC1.45□□□□□ -2.18
LTBRP36941 Y_RNA.173-201ENST00000363776 113 ntBASIC1.45□□□□□ -2.18
LTBRP36941 Y_RNA.290-201ENST00000364879 114 ntBASIC1.45□□□□□ -2.18
LTBRP36941 MIR125B2-201ENST00000385128 89 ntBASIC1.45□□□□□ -2.18
LTBRP36941 RNU6-887P-201ENST00000410660 100 ntBASIC1.45□□□□□ -2.18
LTBRP36941 AC020891.4-201ENST00000605745 93 ntBASIC1.45□□□□□ -2.18
LTBRP36941 AC103810.7-201ENST00000607821 91 ntBASIC1.45□□□□□ -2.18
LTBRP36941 RNU6-1244P-201ENST00000363614 108 ntBASIC1.44□□□□□ -2.18
LTBRP36941 SNORD114-27-201ENST00000363766 70 ntBASIC1.44□□□□□ -2.18
LTBRP36941 BX276092.1-201ENST00000427368 251 ntBASIC1.44□□□□□ -2.18
LTBRP36941 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
LTBRP36941 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
LTBRP36941 MIR4676-201ENST00000583078 72 ntBASIC1.44□□□□□ -2.18
LTBRP36941 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
LTBRP36941 MIR6767-201ENST00000637302 66 ntBASIC1.44□□□□□ -2.18
LTBRP36941 Y_RNA.13-201ENST00000362403 112 ntBASIC1.43□□□□□ -2.18
LTBRP36941 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
LTBRP36941 SNRPGP12-201ENST00000449481 213 ntBASIC1.43□□□□□ -2.18
LTBRP36941 RNU6-1223P-201ENST00000517124 104 ntBASIC1.43□□□□□ -2.18
LTBRP36941 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
LTBRP36941 RNU6-294P-201ENST00000364999 102 ntBASIC1.42□□□□□ -2.18
LTBRP36941 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LTBRP36941 AC004223.1-201ENST00000479840 271 ntBASIC1.42□□□□□ -2.18
LTBRP36941 RNU6-850P-201ENST00000516934 103 ntBASIC1.42□□□□□ -2.18
LTBRP36941 RNU7-156P-201ENST00000517214 74 ntBASIC1.42□□□□□ -2.18
LTBRP36941 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
LTBRP36941 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LTBRP36941 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LTBRP36941 RNU6-571P-201ENST00000384128 107 ntBASIC1.41□□□□□ -2.18
LTBRP36941 MIR100-201ENST00000385259 80 ntBASIC1.41□□□□□ -2.18
LTBRP36941 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
LTBRP36941 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.41□□□□□ -2.18
LTBRP36941 MIR8066-201ENST00000617280 78 ntBASIC1.41□□□□□ -2.18
LTBRP36941 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
LTBRP36941 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
LTBRP36941 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
LTBRP36941 MIR1-1-201ENST00000362147 71 ntBASIC1.4□□□□□ -2.19
LTBRP36941 RNU6-369P-201ENST00000362515 102 ntBASIC1.4□□□□□ -2.19
LTBRP36941 RNU6-1125P-201ENST00000363601 107 ntBASIC1.4□□□□□ -2.19
LTBRP36941 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
LTBRP36941 RNU6-480P-201ENST00000384332 107 ntBASIC1.4□□□□□ -2.19
LTBRP36941 RNU6-364P-201ENST00000384387 107 ntBASIC1.4□□□□□ -2.19
LTBRP36941 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
LTBRP36941 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms