Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 MIR548U-201ENST00000390728 81 ntBASIC1.94□□□□□ -2.1
SOX18P35713 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.94□□□□□ -2.1
SOX18P35713 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.94□□□□□ -2.1
SOX18P35713 AC048334.1-201ENST00000477975 159 ntBASIC1.94□□□□□ -2.1
SOX18P35713 RNU6-1194P-201ENST00000516208 104 ntBASIC1.94□□□□□ -2.1
SOX18P35713 SNORA18.5-201ENST00000516616 101 ntBASIC1.94□□□□□ -2.1
SOX18P35713 SNORD92-201ENST00000585078 85 ntBASIC1.94□□□□□ -2.1
SOX18P35713 AC104996.3-201ENST00000590718 94 ntBASIC1.94□□□□□ -2.1
SOX18P35713 AC145423.2-201ENST00000610631 239 ntBASIC1.94□□□□□ -2.1
SOX18P35713 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SOX18P35713 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SOX18P35713 RNU6-957P-201ENST00000363652 99 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RNU6-934P-201ENST00000365154 107 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RNU7-195P-201ENST00000458793 62 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
SOX18P35713 TRAJ51-201ENST00000504127 63 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RNU6-75P-201ENST00000515944 104 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RN7SKP88-201ENST00000516847 250 ntBASIC1.93□□□□□ -2.1
SOX18P35713 MIR4771-2-201ENST00000577758 74 ntBASIC1.93□□□□□ -2.1
SOX18P35713 MIR548H5-201ENST00000580314 60 ntBASIC1.93□□□□□ -2.1
SOX18P35713 MIR3064-201ENST00000581130 66 ntBASIC1.93□□□□□ -2.1
SOX18P35713 MIR4771-1-201ENST00000582617 74 ntBASIC1.93□□□□□ -2.1
SOX18P35713 RNU7-10P-201ENST00000607194 63 ntBASIC1.93□□□□□ -2.1
SOX18P35713 AL627230.6-201ENST00000611129 280 ntBASIC1.93□□□□□ -2.1
SOX18P35713 7SK.8-201ENST00000612110 250 ntBASIC1.93□□□□□ -2.1
SOX18P35713 7SK.11-201ENST00000615477 250 ntBASIC1.93□□□□□ -2.1
SOX18P35713 7SK.13-201ENST00000622040 250 ntBASIC1.93□□□□□ -2.1
SOX18P35713 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SOX18P35713 MIRLET7F1-201ENST00000362202 87 ntBASIC1.92□□□□□ -2.1
SOX18P35713 RNU6-161P-201ENST00000363051 106 ntBASIC1.92□□□□□ -2.1
SOX18P35713 RNU6-624P-201ENST00000363411 107 ntBASIC1.92□□□□□ -2.1
SOX18P35713 Y_RNA.164-201ENST00000363709 102 ntBASIC1.92□□□□□ -2.1
SOX18P35713 SNORD113.3-201ENST00000364630 78 ntBASIC1.92□□□□□ -2.1
SOX18P35713 RNU6-132P-201ENST00000383863 107 ntBASIC1.92□□□□□ -2.1
SOX18P35713 U8.13-201ENST00000390842 128 ntBASIC1.92□□□□□ -2.1
SOX18P35713 RNU6-380P-201ENST00000410207 107 ntBASIC1.92□□□□□ -2.1
SOX18P35713 AC079804.2-201ENST00000490376 200 ntBASIC1.92□□□□□ -2.1
SOX18P35713 RNU6-1108P-201ENST00000516308 104 ntBASIC1.92□□□□□ -2.1
SOX18P35713 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
SOX18P35713 MIR6082-201ENST00000613604 109 ntBASIC1.92□□□□□ -2.1
SOX18P35713 U7.4-201ENST00000614961 63 ntBASIC1.92□□□□□ -2.1
SOX18P35713 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
SOX18P35713 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SOX18P35713 SNORA25.9-201ENST00000365087 128 ntBASIC1.91□□□□□ -2.1
SOX18P35713 Y_RNA.491-201ENST00000384417 107 ntBASIC1.91□□□□□ -2.1
SOX18P35713 Y_RNA.565-201ENST00000384719 101 ntBASIC1.91□□□□□ -2.1
SOX18P35713 SNORA31.2-201ENST00000516019 134 ntBASIC1.91□□□□□ -2.1
SOX18P35713 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.91□□□□□ -2.1
SOX18P35713 SNORA63.2-201ENST00000362603 126 ntBASIC1.9□□□□□ -2.11
SOX18P35713 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SOX18P35713 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
SOX18P35713 Y_RNA.809-201ENST00000516058 95 ntBASIC1.9□□□□□ -2.11
SOX18P35713 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.9□□□□□ -2.11
SOX18P35713 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
SOX18P35713 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
SOX18P35713 RNU6-1229P-201ENST00000364295 107 ntBASIC1.89□□□□□ -2.11
SOX18P35713 RNU6-686P-201ENST00000364839 107 ntBASIC1.89□□□□□ -2.11
SOX18P35713 SNORA75.2-201ENST00000391138 150 ntBASIC1.89□□□□□ -2.11
SOX18P35713 SNORA75.3-201ENST00000391231 150 ntBASIC1.89□□□□□ -2.11
SOX18P35713 Y_RNA.697-201ENST00000516776 113 ntBASIC1.89□□□□□ -2.11
SOX18P35713 AC036111.3-201ENST00000526389 112 ntBASIC1.89□□□□□ -2.11
SOX18P35713 AC023827.1-201ENST00000569247 97 ntBASIC1.89□□□□□ -2.11
SOX18P35713 MIR3198-2-201ENST00000577868 80 ntBASIC1.89□□□□□ -2.11
SOX18P35713 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
SOX18P35713 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
SOX18P35713 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SOX18P35713 Y_RNA.56-201ENST00000362798 112 ntBASIC1.88□□□□□ -2.11
SOX18P35713 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
SOX18P35713 FGF7P7-201ENST00000514120 227 ntBASIC1.88□□□□□ -2.11
SOX18P35713 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
SOX18P35713 RNU6-557P-201ENST00000516842 110 ntBASIC1.88□□□□□ -2.11
SOX18P35713 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
SOX18P35713 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SOX18P35713 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SOX18P35713 MIR125B2-201ENST00000385128 89 ntBASIC1.87□□□□□ -2.11
SOX18P35713 RPS27P16-201ENST00000425758 201 ntBASIC1.87□□□□□ -2.11
SOX18P35713 AC092628.1-201ENST00000436250 252 ntBASIC1.87□□□□□ -2.11
SOX18P35713 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SOX18P35713 RNU6-1054P-201ENST00000411293 104 ntBASIC1.86□□□□□ -2.11
SOX18P35713 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SOX18P35713 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
SOX18P35713 RNU7-156P-201ENST00000517214 74 ntBASIC1.86□□□□□ -2.11
SOX18P35713 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
SOX18P35713 TRDV1-202ENST00000621643 102 ntBASIC1.86□□□□□ -2.11
SOX18P35713 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SOX18P35713 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
SOX18P35713 MIRLET7A1-201ENST00000362295 80 ntBASIC1.85□□□□□ -2.11
SOX18P35713 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SOX18P35713 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
SOX18P35713 MIR934-201ENST00000401241 83 ntBASIC1.85□□□□□ -2.11
SOX18P35713 RNU6-994P-201ENST00000410507 111 ntBASIC1.85□□□□□ -2.11
SOX18P35713 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SOX18P35713 Y_RNA.660-201ENST00000516002 120 ntBASIC1.85□□□□□ -2.11
SOX18P35713 RNU7-40P-201ENST00000516397 64 ntBASIC1.85□□□□□ -2.11
SOX18P35713 RNU6-765P-201ENST00000516916 99 ntBASIC1.85□□□□□ -2.11
SOX18P35713 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
SOX18P35713 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.85□□□□□ -2.11
SOX18P35713 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.85□□□□□ -2.11
SOX18P35713 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms