Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TRAJ51-201ENST00000504127 63 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 RN7SKP88-201ENST00000516847 250 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 MIR3064-201ENST00000581130 66 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 AC145423.2-201ENST00000610631 239 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 7SK.8-201ENST00000612110 250 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 7SK.11-201ENST00000615477 250 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 7SK.13-201ENST00000622040 250 ntBASIC2.39□□□□□ -2.03
CLCN1P35523 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLCN1P35523 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLCN1P35523 RNU6-132P-201ENST00000383863 107 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 MIR676-201ENST00000390702 67 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 RNU6-1054P-201ENST00000411293 104 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.38□□□□□ -2.03
CLCN1P35523 AL356379.1-201ENST00000414105 126 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 AC015818.7-201ENST00000428754 109 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 RNU7-195P-201ENST00000458793 62 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 MIR4771-2-201ENST00000577758 74 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 MIR4771-1-201ENST00000582617 74 ntBASIC2.38□□□□□ -2.03
CLCN1P35523 SNORA63.2-201ENST00000362603 126 ntBASIC2.37□□□□□ -2.03
CLCN1P35523 Y_RNA.491-201ENST00000384417 107 ntBASIC2.37□□□□□ -2.03
CLCN1P35523 RNA5SP425-201ENST00000410336 112 ntBASIC2.37□□□□□ -2.03
CLCN1P35523 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.37□□□□□ -2.03
CLCN1P35523 AC036111.3-201ENST00000526389 112 ntBASIC2.37□□□□□ -2.03
CLCN1P35523 U7.4-201ENST00000614961 63 ntBASIC2.37□□□□□ -2.03
CLCN1P35523 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.37□□□□□ -2.03
CLCN1P35523 MIRLET7F1-201ENST00000362202 87 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 Y_RNA.56-201ENST00000362798 112 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 SNORA75.2-201ENST00000391138 150 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 SNORA75.3-201ENST00000391231 150 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 RNU6-380P-201ENST00000410207 107 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 Z98742.3-201ENST00000418637 326 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 SNORA31.2-201ENST00000516019 134 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 RNU6-557P-201ENST00000516842 110 ntBASIC2.36□□□□□ -2.03
CLCN1P35523 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLCN1P35523 RNU6-161P-201ENST00000363051 106 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 RNU6-686P-201ENST00000364839 107 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 SNORA25.9-201ENST00000365087 128 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 RNU6-482P-201ENST00000391068 107 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 FGF7P7-201ENST00000514120 227 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 Y_RNA.809-201ENST00000516058 95 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 AC015712.3-201ENST00000559380 164 ntBASIC2.35□□□□□ -2.03
CLCN1P35523 MIR125B2-201ENST00000385128 89 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 RNU4-53P-201ENST00000410828 140 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 RPS27P16-201ENST00000425758 201 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 AL591806.2-201ENST00000433122 173 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 AC092628.1-201ENST00000436250 252 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 RNU6-1108P-201ENST00000516308 104 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 RNU6-765P-201ENST00000516916 99 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
CLCN1P35523 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.33□□□□□ -2.04
CLCN1P35523 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLCN1P35523 RNU6-1229P-201ENST00000364295 107 ntBASIC2.33□□□□□ -2.04
CLCN1P35523 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLCN1P35523 Y_RNA.697-201ENST00000516776 113 ntBASIC2.33□□□□□ -2.04
CLCN1P35523 AC023827.1-201ENST00000569247 97 ntBASIC2.33□□□□□ -2.04
CLCN1P35523 Y_RNA.565-201ENST00000384719 101 ntBASIC2.32□□□□□ -2.04
CLCN1P35523 MIR519A1-201ENST00000385257 85 ntBASIC2.32□□□□□ -2.04
CLCN1P35523 RNU1-78P-201ENST00000391248 165 ntBASIC2.32□□□□□ -2.04
CLCN1P35523 Y_RNA.660-201ENST00000516002 120 ntBASIC2.32□□□□□ -2.04
CLCN1P35523 RNU6-548P-201ENST00000517083 115 ntBASIC2.32□□□□□ -2.04
CLCN1P35523 MIR4422-201ENST00000581938 83 ntBASIC2.32□□□□□ -2.04
CLCN1P35523 MIRLET7A1-201ENST00000362295 80 ntBASIC2.31□□□□□ -2.04
CLCN1P35523 MIR518E-201ENST00000385252 88 ntBASIC2.31□□□□□ -2.04
CLCN1P35523 SNORD111-201ENST00000408139 94 ntBASIC2.31□□□□□ -2.04
CLCN1P35523 RNU7-156P-201ENST00000517214 74 ntBASIC2.31□□□□□ -2.04
CLCN1P35523 MIR3122-201ENST00000577243 73 ntBASIC2.31□□□□□ -2.04
CLCN1P35523 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.31□□□□□ -2.04
CLCN1P35523 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CLCN1P35523 AC008834.1-201ENST00000511612 175 ntBASIC2.3□□□□□ -2.04
CLCN1P35523 AC106800.4-201ENST00000614905 153 ntBASIC2.3□□□□□ -2.04
CLCN1P35523 TRDV1-202ENST00000621643 102 ntBASIC2.3□□□□□ -2.04
CLCN1P35523 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLCN1P35523 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLCN1P35523 Y_RNA.42-201ENST00000362660 108 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 RNU6-1260P-201ENST00000362944 107 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLCN1P35523 MIR934-201ENST00000401241 83 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 MIR1289-2-201ENST00000408360 111 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 RNA5SP247-201ENST00000411181 105 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 RPS26P5-201ENST00000418544 335 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 AL591704.2-201ENST00000421658 181 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 AL096840.1-201ENST00000603287 93 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.29□□□□□ -2.04
CLCN1P35523 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLCN1P35523 Y_RNA.363-201ENST00000365529 113 ntBASIC2.28□□□□□ -2.04
CLCN1P35523 MIR764-201ENST00000390811 85 ntBASIC2.28□□□□□ -2.04
CLCN1P35523 SNORD77.2-201ENST00000391045 68 ntBASIC2.28□□□□□ -2.04
CLCN1P35523 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.28□□□□□ -2.04
CLCN1P35523 RNU7-40P-201ENST00000516397 64 ntBASIC2.28□□□□□ -2.04
CLCN1P35523 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.28□□□□□ -2.04
CLCN1P35523 RNA5SP99-201ENST00000364020 114 ntBASIC2.27□□□□□ -2.05
CLCN1P35523 RNU6-364P-201ENST00000384387 107 ntBASIC2.27□□□□□ -2.05
CLCN1P35523 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
CLCN1P35523 MIR4676-201ENST00000583078 72 ntBASIC2.27□□□□□ -2.05
CLCN1P35523 Y_RNA.545-201ENST00000384652 105 ntBASIC2.26□□□□□ -2.05
CLCN1P35523 RNU6-994P-201ENST00000410507 111 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms