Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 Y_RNA.96-201ENST00000363092 109 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 RNU4-58P-201ENST00000363192 141 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 RNU6-1131P-201ENST00000364955 107 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 MIR488-201ENST00000365739 83 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 RNU6-813P-201ENST00000384691 107 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 BX276092.1-201ENST00000427368 251 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 RNU6-162P-201ENST00000516228 103 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 Y_RNA.705-201ENST00000516862 110 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 MIR4676-201ENST00000583078 72 ntBASIC1.45□□□□□ -2.18
HOXC12P31275 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HOXC12P31275 MIR1-1-201ENST00000362147 71 ntBASIC1.44□□□□□ -2.18
HOXC12P31275 Y_RNA.342-201ENST00000365352 113 ntBASIC1.44□□□□□ -2.18
HOXC12P31275 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HOXC12P31275 RNU7-156P-201ENST00000517214 74 ntBASIC1.44□□□□□ -2.18
HOXC12P31275 MALAT1.1-201ENST00000618249 95 ntBASIC1.44□□□□□ -2.18
HOXC12P31275 Y_RNA.13-201ENST00000362403 112 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 Y_RNA.173-201ENST00000363776 113 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 Y_RNA.220-201ENST00000364244 109 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 RNU6-364P-201ENST00000384387 107 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 MIR100-201ENST00000385259 80 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HOXC12P31275 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
HOXC12P31275 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 AC067940.1-201ENST00000458411 300 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 RNU6-977P-201ENST00000516411 103 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 U7.3-201ENST00000616123 62 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
HOXC12P31275 Y_RNA.369-201ENST00000365568 117 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 RNU6-972P-201ENST00000391208 107 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 AC019288.1-201ENST00000557918 224 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 AC013244.2-201ENST00000603396 103 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 AC103810.7-201ENST00000607821 91 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
HOXC12P31275 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
HOXC12P31275 MIR938-201ENST00000401216 83 ntBASIC1.41□□□□□ -2.18
HOXC12P31275 RNU6-887P-201ENST00000410660 100 ntBASIC1.41□□□□□ -2.18
HOXC12P31275 RNU6-850P-201ENST00000516934 103 ntBASIC1.41□□□□□ -2.18
HOXC12P31275 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
HOXC12P31275 MIR101-2-201ENST00000362195 79 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 RNU6-1244P-201ENST00000363614 108 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 Y_RNA.290-201ENST00000364879 114 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 RNU6-49P-201ENST00000384256 107 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 RNY1P7-201ENST00000384743 110 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 MIR7-2-201ENST00000384970 110 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 AC006254.2-201ENST00000603259 279 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
HOXC12P31275 RNU6-369P-201ENST00000362515 102 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 RNU6-1125P-201ENST00000363601 107 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 Y_RNA.191-201ENST00000363972 113 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 RNU6-571P-201ENST00000384128 107 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 RNU6-480P-201ENST00000384332 107 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 Y_RNA.540-201ENST00000384638 111 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 SNRPGP12-201ENST00000449481 213 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 MIR4804-201ENST00000581683 73 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 MIR4452-201ENST00000583004 71 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 MIR8066-201ENST00000617280 78 ntBASIC1.39□□□□□ -2.19
HOXC12P31275 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
HOXC12P31275 RNU6-42P-201ENST00000384165 107 ntBASIC1.38□□□□□ -2.19
HOXC12P31275 MIR181B2-201ENST00000385004 89 ntBASIC1.38□□□□□ -2.19
HOXC12P31275 SNORA31.24-201ENST00000517232 57 ntBASIC1.38□□□□□ -2.19
HOXC12P31275 SNORD92-201ENST00000585078 85 ntBASIC1.38□□□□□ -2.19
HOXC12P31275 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
HOXC12P31275 Y_RNA.57-201ENST00000362806 113 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 Y_RNA.190-201ENST00000363964 101 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 SNORD58A-201ENST00000383875 65 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 MIR520F-201ENST00000384824 87 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 RNU7-56P-201ENST00000458744 62 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 RNU7-102P-201ENST00000458948 62 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 RNU6-1194P-201ENST00000516208 104 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 RNU6-765P-201ENST00000516916 99 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
HOXC12P31275 Y_RNA.42-201ENST00000362660 108 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 SNORD48-201ENST00000364953 64 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 RNU6-294P-201ENST00000364999 102 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 SNORD89-201ENST00000390981 114 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 RNU1-119P-201ENST00000391122 165 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 MIR1827-201ENST00000408549 66 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 Y_RNA.697-201ENST00000516776 113 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
HOXC12P31275 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
HOXC12P31275 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
HOXC12P31275 SNORD100-201ENST00000408573 76 ntBASIC1.35□□□□□ -2.19
HOXC12P31275 RNA5SP220-201ENST00000516298 104 ntBASIC1.35□□□□□ -2.19
HOXC12P31275 RNU6-844P-201ENST00000517175 102 ntBASIC1.35□□□□□ -2.19
HOXC12P31275 MIR635-201ENST00000384830 98 ntBASIC1.34□□□□□ -2.19
HOXC12P31275 MIR942-201ENST00000401111 86 ntBASIC1.34□□□□□ -2.19
HOXC12P31275 FABP5P4-201ENST00000437203 171 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms