Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 Y_RNA.342-201ENST00000365352 113 ntBASIC1.18□□□□□ -2.22
TNFRSF8P28908 MIR34C-201ENST00000384831 77 ntBASIC1.18□□□□□ -2.22
TNFRSF8P28908 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TNFRSF8P28908 RNU6-795P-201ENST00000516323 103 ntBASIC1.18□□□□□ -2.22
TNFRSF8P28908 AC103810.9-201ENST00000606688 112 ntBASIC1.18□□□□□ -2.22
TNFRSF8P28908 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
TNFRSF8P28908 AC091304.10-201ENST00000641554 121 ntBASIC1.18□□□□□ -2.22
TNFRSF8P28908 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 Y_RNA.95-201ENST00000363079 95 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 Y_RNA.448-201ENST00000384185 108 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 RNA5SP237-201ENST00000410414 113 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 MIR548Z-201ENST00000584743 97 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 AC006254.2-201ENST00000603259 279 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 AP000753.3-201ENST00000604083 169 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 MIR376B-201ENST00000614515 100 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 AC105081.1-201ENST00000617727 106 ntBASIC1.17□□□□□ -2.22
TNFRSF8P28908 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TNFRSF8P28908 MIR103A2-201ENST00000362154 78 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 Y_RNA.98-201ENST00000363109 102 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 SNORD38.1-201ENST00000363863 68 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 RNU6-654P-201ENST00000364373 107 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 SNORD45B-201ENST00000364617 72 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 RNU6-1131P-201ENST00000364955 107 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 MIR4439-201ENST00000583746 80 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 AL590095.2-201ENST00000604136 117 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 AC096720.1-201ENST00000604441 183 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 uc_338.6-201ENST00000613544 171 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 MALAT1.1-201ENST00000618249 95 ntBASIC1.16□□□□□ -2.22
TNFRSF8P28908 RNA5SP62-201ENST00000363457 110 ntBASIC1.15□□□□□ -2.23
TNFRSF8P28908 RNU6-205P-201ENST00000390858 107 ntBASIC1.15□□□□□ -2.23
TNFRSF8P28908 RNU6-644P-201ENST00000391155 98 ntBASIC1.15□□□□□ -2.23
TNFRSF8P28908 RNU6-1165P-201ENST00000410119 107 ntBASIC1.15□□□□□ -2.23
TNFRSF8P28908 RNU7-48P-201ENST00000458875 63 ntBASIC1.15□□□□□ -2.23
TNFRSF8P28908 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNU1-124P-201ENST00000363861 145 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNU6-1163P-201ENST00000364516 107 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNY1P2-201ENST00000364820 117 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 Y_RNA.290-201ENST00000364879 114 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNY1P7-201ENST00000384743 110 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 U8.15-201ENST00000390947 134 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 AC109327.2-201ENST00000448339 378 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNU7-62P-201ENST00000458856 62 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 AC048334.1-201ENST00000477975 159 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNU7-61P-201ENST00000515897 61 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 Y_RNA.659-201ENST00000515994 113 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 RNU6-844P-201ENST00000517175 102 ntBASIC1.14□□□□□ -2.23
TNFRSF8P28908 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.14□□□□□ -2.23
TNFRSF8P28908 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFRSF8P28908 Y_RNA.168-201ENST00000363740 102 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 Y_RNA.220-201ENST00000364244 109 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 RNU6-865P-201ENST00000364772 107 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 RNU6-294P-201ENST00000364999 102 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 Y_RNA.363-201ENST00000365529 113 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 Y_RNA.467-201ENST00000384297 102 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 MT-TF-201ENST00000387314 71 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
TNFRSF8P28908 RNA5SP95-201ENST00000410319 137 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 SEPT14P17-201ENST00000617978 177 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 AP001362.1-201ENST00000625165 124 ntBASIC1.13□□□□□ -2.23
TNFRSF8P28908 HSBP1P2-201ENST00000299671 229 ntBASIC1.12□□□□□ -2.23
TNFRSF8P28908 Y_RNA.173-201ENST00000363776 113 ntBASIC1.12□□□□□ -2.23
TNFRSF8P28908 MIR548G-201ENST00000408442 89 ntBASIC1.12□□□□□ -2.23
TNFRSF8P28908 AC138749.4-201ENST00000563970 127 ntBASIC1.12□□□□□ -2.23
TNFRSF8P28908 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFRSF8P28908 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
TNFRSF8P28908 RNA5SP257-201ENST00000363023 116 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 Y_RNA.96-201ENST00000363092 109 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 RNU6-813P-201ENST00000384691 107 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 MIR18B-201ENST00000454574 71 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 Y_RNA.705-201ENST00000516862 110 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 AC133485.1-201ENST00000567176 124 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 RNU6-90P-201ENST00000606352 106 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 U7.3-201ENST00000616123 62 ntBASIC1.11□□□□□ -2.23
TNFRSF8P28908 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
TNFRSF8P28908 SNORA75.2-201ENST00000391138 150 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 RNU6-972P-201ENST00000391208 107 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 SNORA75.3-201ENST00000391231 150 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 RNU6-887P-201ENST00000410660 100 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 SNORA31.2-201ENST00000516019 134 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 AC036111.3-201ENST00000526389 112 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 RNU6-86P-201ENST00000606534 107 ntBASIC1.1□□□□□ -2.23
TNFRSF8P28908 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
TNFRSF8P28908 RNU6-1244P-201ENST00000363614 108 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 SNORD73B-201ENST00000364394 72 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 SNORD38.2-201ENST00000384470 69 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 Y_RNA.558-201ENST00000384685 113 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 Y_RNA.567-201ENST00000384736 106 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 MIR1302-4-201ENST00000408701 150 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.09□□□□□ -2.23
TNFRSF8P28908 RNU6-162P-201ENST00000516228 103 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 AC026421.1-201ENST00000519101 163 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 AL109933.3-201ENST00000619095 188 ntBASIC1.09□□□□□ -2.23
TNFRSF8P28908 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms