Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RNU6-834P-201ENST00000362367 110 ntBASIC1.11□□□□□ -2.23
ATP2B1P20020 RNU6-880P-201ENST00000384526 107 ntBASIC1.11□□□□□ -2.23
ATP2B1P20020 RNU6-476P-201ENST00000384726 107 ntBASIC1.11□□□□□ -2.23
ATP2B1P20020 MIR34C-201ENST00000384831 77 ntBASIC1.11□□□□□ -2.23
ATP2B1P20020 MIR520E-201ENST00000384867 87 ntBASIC1.11□□□□□ -2.23
ATP2B1P20020 RNU6-733P-201ENST00000410759 104 ntBASIC1.11□□□□□ -2.23
ATP2B1P20020 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ATP2B1P20020 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
ATP2B1P20020 Y_RNA.360-201ENST00000365512 102 ntBASIC1.1□□□□□ -2.23
ATP2B1P20020 RNU6-1056P-201ENST00000383996 107 ntBASIC1.1□□□□□ -2.23
ATP2B1P20020 Y_RNA.536-201ENST00000384621 113 ntBASIC1.1□□□□□ -2.23
ATP2B1P20020 RNU6-1018P-201ENST00000516577 106 ntBASIC1.1□□□□□ -2.23
ATP2B1P20020 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
ATP2B1P20020 RNU6-679P-201ENST00000391003 106 ntBASIC1.09□□□□□ -2.23
ATP2B1P20020 RNA5SP222-201ENST00000411039 105 ntBASIC1.09□□□□□ -2.23
ATP2B1P20020 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.09□□□□□ -2.23
ATP2B1P20020 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.09□□□□□ -2.23
ATP2B1P20020 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
ATP2B1P20020 PSMC1P5-201ENST00000512850 177 ntBASIC1.09□□□□□ -2.23
ATP2B1P20020 RNU6-412P-201ENST00000516434 106 ntBASIC1.09□□□□□ -2.23
ATP2B1P20020 Y_RNA.49-201ENST00000362714 112 ntBASIC1.08□□□□□ -2.24
ATP2B1P20020 SNORD38.2-201ENST00000384470 69 ntBASIC1.08□□□□□ -2.24
ATP2B1P20020 RNU6-535P-201ENST00000384722 107 ntBASIC1.08□□□□□ -2.24
ATP2B1P20020 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.08□□□□□ -2.24
ATP2B1P20020 AC068339.1-201ENST00000526965 141 ntBASIC1.08□□□□□ -2.24
ATP2B1P20020 Y_RNA.35-201ENST00000362601 101 ntBASIC1.07□□□□□ -2.24
ATP2B1P20020 RNU6-1313P-201ENST00000362622 102 ntBASIC1.07□□□□□ -2.24
ATP2B1P20020 Y_RNA.281-201ENST00000364774 94 ntBASIC1.07□□□□□ -2.24
ATP2B1P20020 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
ATP2B1P20020 RNU4-45P-201ENST00000365469 141 ntBASIC1.06□□□□□ -2.24
ATP2B1P20020 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
ATP2B1P20020 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
ATP2B1P20020 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
ATP2B1P20020 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
ATP2B1P20020 Y_RNA.174-201ENST00000363781 105 ntBASIC1.05□□□□□ -2.24
ATP2B1P20020 AC004941.2-201ENST00000427009 228 ntBASIC1.05□□□□□ -2.24
ATP2B1P20020 MIR548AI-201ENST00000579940 88 ntBASIC1.05□□□□□ -2.24
ATP2B1P20020 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.05□□□□□ -2.24
ATP2B1P20020 MIR18A-201ENST00000362310 71 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 Y_RNA.56-201ENST00000362798 112 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 U8.6-201ENST00000364939 135 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 MIR548I2-201ENST00000408348 149 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 AL353813.1-201ENST00000440700 253 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 MIR5009-201ENST00000578736 100 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 MIR548H5-201ENST00000580314 60 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 MIR151B-201ENST00000584249 96 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 MIR6788-201ENST00000618842 66 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 uc_338.16-201ENST00000621804 95 ntBASIC1.04□□□□□ -2.24
ATP2B1P20020 Y_RNA.273-201ENST00000364703 102 ntBASIC1.03□□□□□ -2.24
ATP2B1P20020 RNU7-10P-201ENST00000607194 63 ntBASIC1.03□□□□□ -2.24
ATP2B1P20020 MIR6129-201ENST00000616087 109 ntBASIC1.03□□□□□ -2.24
ATP2B1P20020 HSBP1P2-201ENST00000299671 229 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 MIR548J-201ENST00000408833 112 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 BX276092.1-201ENST00000427368 251 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 RNU6-469P-201ENST00000516253 101 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 SNORA31.14-201ENST00000516728 116 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 MTND5P40-201ENST00000559945 246 ntBASIC1.02□□□□□ -2.25
ATP2B1P20020 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 SNORA36.2-201ENST00000384004 127 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 RNU6-1201P-201ENST00000384227 107 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 AL442128.1-201ENST00000615151 90 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 AC022709.1-201ENST00000615967 87 ntBASIC1.01□□□□□ -2.25
ATP2B1P20020 SNORD38.1-201ENST00000363863 68 ntBASIC1□□□□□ -2.25
ATP2B1P20020 RNU6-1107P-201ENST00000364817 104 ntBASIC1□□□□□ -2.25
ATP2B1P20020 MIR635-201ENST00000384830 98 ntBASIC1□□□□□ -2.25
ATP2B1P20020 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
ATP2B1P20020 Y_RNA.629-201ENST00000411368 105 ntBASIC1□□□□□ -2.25
ATP2B1P20020 RNU6-1006P-201ENST00000516998 103 ntBASIC1□□□□□ -2.25
ATP2B1P20020 MIR3678-201ENST00000578455 94 ntBASIC1□□□□□ -2.25
ATP2B1P20020 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1□□□□□ -2.25
ATP2B1P20020 Y_RNA.323-201ENST00000365157 109 ntBASIC0.99□□□□□ -2.25
ATP2B1P20020 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.99□□□□□ -2.25
ATP2B1P20020 MIR4694-201ENST00000578534 80 ntBASIC0.99□□□□□ -2.25
ATP2B1P20020 MIR4653-201ENST00000585107 83 ntBASIC0.99□□□□□ -2.25
ATP2B1P20020 AC096720.1-201ENST00000604441 183 ntBASIC0.99□□□□□ -2.25
ATP2B1P20020 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
ATP2B1P20020 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 Y_RNA.291-201ENST00000364886 113 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 RNU6-571P-201ENST00000384128 107 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 MIR146A-201ENST00000385201 99 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 MIR644A-201ENST00000385262 94 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 SPINT5P-201ENST00000448174 155 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 RNU6-135P-201ENST00000516769 101 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 AC138907.6-201ENST00000568401 126 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 AC138869.1-201ENST00000568623 124 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 RNU6-90P-201ENST00000606352 106 ntBASIC0.98□□□□□ -2.25
ATP2B1P20020 RNU6-1290P-201ENST00000362957 109 ntBASIC0.97□□□□□ -2.25
ATP2B1P20020 Y_RNA.377-201ENST00000365644 108 ntBASIC0.97□□□□□ -2.25
ATP2B1P20020 RNU6-1014P-201ENST00000383940 103 ntBASIC0.97□□□□□ -2.25
ATP2B1P20020 MIR577-201ENST00000385196 96 ntBASIC0.97□□□□□ -2.25
ATP2B1P20020 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.97□□□□□ -2.25
ATP2B1P20020 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.97□□□□□ -2.25
ATP2B1P20020 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
ATP2B1P20020 RNA5SP245-201ENST00000364239 121 ntBASIC0.96□□□□□ -2.26
ATP2B1P20020 Y_RNA.247-201ENST00000364500 92 ntBASIC0.96□□□□□ -2.26
ATP2B1P20020 MIR548G-201ENST00000408442 89 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms