Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.09□□□□□ -1.91
CD44P16070 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CD44P16070 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD44P16070 SNORD115-24-201ENST00000363528 82 ntBASIC3.08□□□□□ -1.92
CD44P16070 MIR627-201ENST00000384979 97 ntBASIC3.08□□□□□ -1.92
CD44P16070 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
CD44P16070 SCARNA13-201ENST00000516672 275 ntBASIC3.08□□□□□ -1.92
CD44P16070 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
CD44P16070 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD44P16070 RNU6-986P-201ENST00000363133 102 ntBASIC3.07□□□□□ -1.92
CD44P16070 U8.2-201ENST00000363156 134 ntBASIC3.07□□□□□ -1.92
CD44P16070 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
CD44P16070 RNU6-269P-201ENST00000391077 97 ntBASIC3.07□□□□□ -1.92
CD44P16070 MIR3605-201ENST00000583214 100 ntBASIC3.07□□□□□ -1.92
CD44P16070 MIR4635-201ENST00000583759 79 ntBASIC3.07□□□□□ -1.92
CD44P16070 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CD44P16070 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.06□□□□□ -1.92
CD44P16070 AC107016.2-201ENST00000547968 190 ntBASIC3.06□□□□□ -1.92
CD44P16070 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.06□□□□□ -1.92
CD44P16070 RNU6-851P-201ENST00000384565 107 ntBASIC3.05□□□□□ -1.92
CD44P16070 AC079600.2-201ENST00000550076 130 ntBASIC3.05□□□□□ -1.92
CD44P16070 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.05□□□□□ -1.92
CD44P16070 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.05□□□□□ -1.92
CD44P16070 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD44P16070 MIR26A1-201ENST00000362205 77 ntBASIC3.04□□□□□ -1.92
CD44P16070 Y_RNA.125-201ENST00000363371 111 ntBASIC3.04□□□□□ -1.92
CD44P16070 SNORD116-16-201ENST00000384533 92 ntBASIC3.04□□□□□ -1.92
CD44P16070 EEF1A1P41-201ENST00000414667 207 ntBASIC3.04□□□□□ -1.92
CD44P16070 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
CD44P16070 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
CD44P16070 AC108210.2-201ENST00000503681 201 ntBASIC3.04□□□□□ -1.92
CD44P16070 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.04□□□□□ -1.92
CD44P16070 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD44P16070 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CD44P16070 RNU6-810P-201ENST00000364001 107 ntBASIC3.03□□□□□ -1.92
CD44P16070 RNU1-112P-201ENST00000364401 164 ntBASIC3.03□□□□□ -1.92
CD44P16070 RNU6-364P-201ENST00000384387 107 ntBASIC3.03□□□□□ -1.92
CD44P16070 RNU6-1246P-201ENST00000391064 107 ntBASIC3.03□□□□□ -1.92
CD44P16070 RNU7-104P-201ENST00000459398 79 ntBASIC3.03□□□□□ -1.92
CD44P16070 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CD44P16070 SNORA9.1-201ENST00000362412 131 ntBASIC3.02□□□□□ -1.93
CD44P16070 SNORA33.1-201ENST00000364957 130 ntBASIC3.02□□□□□ -1.93
CD44P16070 MIR23B-201ENST00000384832 97 ntBASIC3.02□□□□□ -1.93
CD44P16070 JTBP1-201ENST00000441314 247 ntBASIC3.02□□□□□ -1.93
CD44P16070 SNORA44-201ENST00000384584 132 ntBASIC3.01□□□□□ -1.93
CD44P16070 MT-TY-201ENST00000387409 66 ntBASIC3.01□□□□□ -1.93
CD44P16070 SNORA31.11-201ENST00000516528 139 ntBASIC3.01□□□□□ -1.93
CD44P16070 MIR4676-201ENST00000583078 72 ntBASIC3.01□□□□□ -1.93
CD44P16070 MIR92B-201ENST00000607575 96 ntBASIC3.01□□□□□ -1.93
CD44P16070 MIR208A-201ENST00000362287 71 ntBASIC3□□□□□ -1.93
CD44P16070 SNORA15B-2-201ENST00000384058 135 ntBASIC3□□□□□ -1.93
CD44P16070 SNORA15B-1-201ENST00000384334 135 ntBASIC3□□□□□ -1.93
CD44P16070 RNU6-419P-201ENST00000517030 63 ntBASIC3□□□□□ -1.93
CD44P16070 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD44P16070 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CD44P16070 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
CD44P16070 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD44P16070 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD44P16070 Y_RNA.32-201ENST00000362589 110 ntBASIC2.99□□□□□ -1.93
CD44P16070 SNORD114-4-201ENST00000363962 75 ntBASIC2.99□□□□□ -1.93
CD44P16070 SNORD113.3-201ENST00000364630 78 ntBASIC2.99□□□□□ -1.93
CD44P16070 SNORA48.8-201ENST00000391324 134 ntBASIC2.99□□□□□ -1.93
CD44P16070 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
CD44P16070 RNU7-102P-201ENST00000458948 62 ntBASIC2.99□□□□□ -1.93
CD44P16070 RNU1-123P-201ENST00000458950 160 ntBASIC2.99□□□□□ -1.93
CD44P16070 RNU7-74P-201ENST00000459104 62 ntBASIC2.99□□□□□ -1.93
CD44P16070 S100A11P2-201ENST00000467589 312 ntBASIC2.99□□□□□ -1.93
CD44P16070 SNORA31.14-201ENST00000516728 116 ntBASIC2.99□□□□□ -1.93
CD44P16070 MIR4325-201ENST00000583049 90 ntBASIC2.99□□□□□ -1.93
CD44P16070 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.99□□□□□ -1.93
CD44P16070 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD44P16070 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
CD44P16070 AC098934.3-201ENST00000430450 190 ntBASIC2.98□□□□□ -1.93
CD44P16070 Y_RNA.633-201ENST00000459107 95 ntBASIC2.98□□□□□ -1.93
CD44P16070 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
CD44P16070 RNU6-548P-201ENST00000517083 115 ntBASIC2.98□□□□□ -1.93
CD44P16070 AC027335.2-201ENST00000624030 375 ntBASIC2.98□□□□□ -1.93
CD44P16070 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
CD44P16070 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.98□□□□□ -1.93
CD44P16070 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CD44P16070 MIR938-201ENST00000401216 83 ntBASIC2.97□□□□□ -1.93
CD44P16070 RPS26P5-201ENST00000418544 335 ntBASIC2.97□□□□□ -1.93
CD44P16070 uc_338.16-201ENST00000621804 95 ntBASIC2.97□□□□□ -1.93
CD44P16070 AC067863.3-201ENST00000624172 122 ntBASIC2.97□□□□□ -1.93
CD44P16070 U6.103-201ENST00000637085 61 ntBASIC2.97□□□□□ -1.93
CD44P16070 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
CD44P16070 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CD44P16070 SNORA11-201ENST00000408789 128 ntBASIC2.96□□□□□ -1.94
CD44P16070 RNA5SP450-201ENST00000411206 102 ntBASIC2.96□□□□□ -1.94
CD44P16070 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.96□□□□□ -1.94
CD44P16070 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
CD44P16070 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.95□□□□□ -1.94
CD44P16070 AL359851.1-201ENST00000569460 4997 ntBASIC2.95□□□□□ -1.94
CD44P16070 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD44P16070 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD44P16070 SNORD46.1-201ENST00000364139 104 ntBASIC2.95□□□□□ -1.94
CD44P16070 RNA5SP210-201ENST00000391034 120 ntBASIC2.95□□□□□ -1.94
CD44P16070 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.95□□□□□ -1.94
CD44P16070 SNORA25.8-201ENST00000364831 128 ntBASIC2.94□□□□□ -1.94
CD44P16070 RNA5SP21-201ENST00000410917 96 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms