Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 RNU6-497P-201ENST00000365316 104 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 RNU6-675P-201ENST00000384236 104 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 SNORD38.2-201ENST00000384470 69 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 RNY1P4-201ENST00000384595 115 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 RNU6-1165P-201ENST00000410119 107 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 AC138749.4-201ENST00000563970 127 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 AC090897.1-201ENST00000580909 226 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 MIR4668-201ENST00000582284 70 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 RMST_2.1-201ENST00000617263 136 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 U6.109-201ENST00000636749 87 ntBASIC1.49□□□□□ -2.17
ITGB1P05556 Y_RNA.168-201ENST00000363740 102 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 RNY1P2-201ENST00000364820 117 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 SNORA2B-201ENST00000384583 137 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 MIR181B2-201ENST00000385004 89 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 RNU6-613P-201ENST00000410412 108 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 RN7SKP88-201ENST00000516847 250 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 AP003327.1-201ENST00000529684 127 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 7SK.8-201ENST00000612110 250 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 7SK.11-201ENST00000615477 250 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 7SK.13-201ENST00000622040 250 ntBASIC1.48□□□□□ -2.17
ITGB1P05556 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ITGB1P05556 MIR377-201ENST00000362145 69 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 RNU6-42P-201ENST00000384165 107 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ITGB1P05556 Y_RNA.609-201ENST00000410669 89 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 Y_RNA.620-201ENST00000411009 88 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 MIR4500-201ENST00000579472 76 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 AC025521.1-201ENST00000621624 286 ntBASIC1.47□□□□□ -2.17
ITGB1P05556 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ITGB1P05556 HSBP1P2-201ENST00000299671 229 ntBASIC1.46□□□□□ -2.18
ITGB1P05556 RNA5SP133-201ENST00000363368 119 ntBASIC1.46□□□□□ -2.18
ITGB1P05556 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.46□□□□□ -2.18
ITGB1P05556 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
ITGB1P05556 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
ITGB1P05556 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.46□□□□□ -2.18
ITGB1P05556 AL513043.2-201ENST00000573941 143 ntBASIC1.46□□□□□ -2.18
ITGB1P05556 AL078603.1-201ENST00000603824 313 ntBASIC1.46□□□□□ -2.18
ITGB1P05556 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
ITGB1P05556 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
ITGB1P05556 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
ITGB1P05556 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
ITGB1P05556 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ITGB1P05556 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
ITGB1P05556 RNU6-1275P-201ENST00000391087 107 ntBASIC1.45□□□□□ -2.18
ITGB1P05556 RNU4-83P-201ENST00000410863 133 ntBASIC1.45□□□□□ -2.18
ITGB1P05556 RNA5SP220-201ENST00000516298 104 ntBASIC1.45□□□□□ -2.18
ITGB1P05556 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
ITGB1P05556 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.44□□□□□ -2.18
ITGB1P05556 Y_RNA.119-201ENST00000363301 96 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 RNU6-1276P-201ENST00000365372 104 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 Y_RNA.540-201ENST00000384638 111 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 SNORD78.1-201ENST00000390866 65 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 BX276092.1-201ENST00000427368 251 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 SNORA31.2-201ENST00000516019 134 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 MIR5588-201ENST00000581890 63 ntBASIC1.44□□□□□ -2.18
ITGB1P05556 Y_RNA.219-201ENST00000364232 113 ntBASIC1.43□□□□□ -2.18
ITGB1P05556 RNU6-580P-201ENST00000365159 107 ntBASIC1.43□□□□□ -2.18
ITGB1P05556 RNU6-979P-201ENST00000383896 107 ntBASIC1.43□□□□□ -2.18
ITGB1P05556 snoU13.21-201ENST00000459368 105 ntBASIC1.43□□□□□ -2.18
ITGB1P05556 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
ITGB1P05556 MIR6734-201ENST00000621166 68 ntBASIC1.43□□□□□ -2.18
ITGB1P05556 RNU6-228P-201ENST00000362700 106 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 RNU6-1125P-201ENST00000363601 107 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 Y_RNA.363-201ENST00000365529 113 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 RNU6-1124P-201ENST00000384169 107 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 RNU6-480P-201ENST00000384332 107 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 RNU6-242P-201ENST00000384359 107 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 MT-TF-201ENST00000387314 71 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 Y_RNA.611-201ENST00000410682 108 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 SNRPGP12-201ENST00000449481 213 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 RNU6-850P-201ENST00000516934 103 ntBASIC1.42□□□□□ -2.18
ITGB1P05556 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 RNU6-787P-201ENST00000384032 107 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 SNORA75.2-201ENST00000391138 150 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 SNORA75.3-201ENST00000391231 150 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 RNA5SP225-201ENST00000410874 135 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 SNORA25.16-201ENST00000516741 121 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 MIR4491-201ENST00000581087 68 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 MIR548BB-201ENST00000626714 66 ntBASIC1.41□□□□□ -2.18
ITGB1P05556 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ITGB1P05556 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
ITGB1P05556 RNU6-509P-201ENST00000363519 107 ntBASIC1.4□□□□□ -2.19
ITGB1P05556 SNORD115-27-201ENST00000364430 82 ntBASIC1.4□□□□□ -2.19
ITGB1P05556 Y_RNA.330-201ENST00000365230 109 ntBASIC1.4□□□□□ -2.19
ITGB1P05556 SNORD93-201ENST00000408813 74 ntBASIC1.4□□□□□ -2.19
ITGB1P05556 RNU6-531P-201ENST00000516694 104 ntBASIC1.4□□□□□ -2.19
ITGB1P05556 AC008163.1-202ENST00000636004 2889 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 RNU6-633P-201ENST00000362612 103 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 Y_RNA.57-201ENST00000362806 113 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 Y_RNA.588-201ENST00000391254 102 ntBASIC1.39□□□□□ -2.19
ITGB1P05556 MIR1255A-201ENST00000408338 113 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms