Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.55□□□□□ -2.16
CHGBP05060 SNORA25.16-201ENST00000516741 121 ntBASIC1.55□□□□□ -2.16
CHGBP05060 RNU11-2P-201ENST00000516898 142 ntBASIC1.55□□□□□ -2.16
CHGBP05060 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
CHGBP05060 AC025521.1-201ENST00000621624 286 ntBASIC1.55□□□□□ -2.16
CHGBP05060 AC023934.1-201ENST00000574529 2389 ntBASIC1.55□□□□□ -2.16
CHGBP05060 SNORD116-10-201ENST00000363791 102 ntBASIC1.54□□□□□ -2.16
CHGBP05060 RNU6-820P-201ENST00000384273 107 ntBASIC1.54□□□□□ -2.16
CHGBP05060 MT-TF-201ENST00000387314 71 ntBASIC1.54□□□□□ -2.16
CHGBP05060 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
CHGBP05060 AL359821.1-201ENST00000605519 182 ntBASIC1.54□□□□□ -2.16
CHGBP05060 Y_RNA.173-201ENST00000363776 113 ntBASIC1.53□□□□□ -2.16
CHGBP05060 Y_RNA.191-201ENST00000363972 113 ntBASIC1.53□□□□□ -2.16
CHGBP05060 RNU6-497P-201ENST00000365316 104 ntBASIC1.53□□□□□ -2.16
CHGBP05060 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CHGBP05060 SNORA75.2-201ENST00000391138 150 ntBASIC1.53□□□□□ -2.16
CHGBP05060 SNORA75.3-201ENST00000391231 150 ntBASIC1.53□□□□□ -2.16
CHGBP05060 AC022137.1-201ENST00000483735 151 ntBASIC1.53□□□□□ -2.16
CHGBP05060 RNU6-531P-201ENST00000516694 104 ntBASIC1.53□□□□□ -2.16
CHGBP05060 AL513043.2-201ENST00000573941 143 ntBASIC1.53□□□□□ -2.16
CHGBP05060 AL157834.3-201ENST00000615543 103 ntBASIC1.53□□□□□ -2.16
CHGBP05060 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
CHGBP05060 AL353770.2-201ENST00000620024 78 ntBASIC1.53□□□□□ -2.16
CHGBP05060 SNORD26-201ENST00000384147 75 ntBASIC1.52□□□□□ -2.17
CHGBP05060 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
CHGBP05060 RNU4-83P-201ENST00000410863 133 ntBASIC1.52□□□□□ -2.17
CHGBP05060 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.52□□□□□ -2.17
CHGBP05060 MIR4491-201ENST00000581087 68 ntBASIC1.52□□□□□ -2.17
CHGBP05060 MIR4668-201ENST00000582284 70 ntBASIC1.52□□□□□ -2.17
CHGBP05060 MIR1245B-201ENST00000636115 69 ntBASIC1.52□□□□□ -2.17
CHGBP05060 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CHGBP05060 MIR377-201ENST00000362145 69 ntBASIC1.51□□□□□ -2.17
CHGBP05060 Y_RNA.57-201ENST00000362806 113 ntBASIC1.51□□□□□ -2.17
CHGBP05060 RNU6-1125P-201ENST00000363601 107 ntBASIC1.51□□□□□ -2.17
CHGBP05060 RNU1-36P-201ENST00000365130 165 ntBASIC1.51□□□□□ -2.17
CHGBP05060 RNU6-480P-201ENST00000384332 107 ntBASIC1.51□□□□□ -2.17
CHGBP05060 RPS29P23-201ENST00000458635 123 ntBASIC1.51□□□□□ -2.17
CHGBP05060 RNU6-850P-201ENST00000516934 103 ntBASIC1.51□□□□□ -2.17
CHGBP05060 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHGBP05060 HSBP1P2-201ENST00000299671 229 ntBASIC1.5□□□□□ -2.17
CHGBP05060 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
CHGBP05060 Y_RNA.363-201ENST00000365529 113 ntBASIC1.5□□□□□ -2.17
CHGBP05060 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.5□□□□□ -2.17
CHGBP05060 MIR4771-2-201ENST00000577758 74 ntBASIC1.5□□□□□ -2.17
CHGBP05060 MIR4771-1-201ENST00000582617 74 ntBASIC1.5□□□□□ -2.17
CHGBP05060 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.5□□□□□ -2.17
CHGBP05060 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CHGBP05060 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CHGBP05060 RNU6-934P-201ENST00000365154 107 ntBASIC1.49□□□□□ -2.17
CHGBP05060 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
CHGBP05060 MIR1257-201ENST00000408490 117 ntBASIC1.49□□□□□ -2.17
CHGBP05060 MIR18B-201ENST00000454574 71 ntBASIC1.49□□□□□ -2.17
CHGBP05060 RNU7-185P-201ENST00000459215 60 ntBASIC1.49□□□□□ -2.17
CHGBP05060 Y_RNA.4-201ENST00000362333 112 ntBASIC1.48□□□□□ -2.17
CHGBP05060 Y_RNA.164-201ENST00000363709 102 ntBASIC1.48□□□□□ -2.17
CHGBP05060 SNORD113.3-201ENST00000364630 78 ntBASIC1.48□□□□□ -2.17
CHGBP05060 RNU6-580P-201ENST00000365159 107 ntBASIC1.48□□□□□ -2.17
CHGBP05060 Y_RNA.588-201ENST00000391254 102 ntBASIC1.48□□□□□ -2.17
CHGBP05060 Y_RNA.611-201ENST00000410682 108 ntBASIC1.48□□□□□ -2.17
CHGBP05060 RNU6-1054P-201ENST00000411293 104 ntBASIC1.48□□□□□ -2.17
CHGBP05060 SNRPGP12-201ENST00000449481 213 ntBASIC1.48□□□□□ -2.17
CHGBP05060 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
CHGBP05060 AC036111.3-201ENST00000526389 112 ntBASIC1.48□□□□□ -2.17
CHGBP05060 MIR8066-201ENST00000617280 78 ntBASIC1.48□□□□□ -2.17
CHGBP05060 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CHGBP05060 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CHGBP05060 RNU4-58P-201ENST00000363192 141 ntBASIC1.47□□□□□ -2.17
CHGBP05060 RNU6-219P-201ENST00000364728 107 ntBASIC1.47□□□□□ -2.17
CHGBP05060 Y_RNA.620-201ENST00000411009 88 ntBASIC1.47□□□□□ -2.17
CHGBP05060 TRMT112P2-201ENST00000512910 132 ntBASIC1.47□□□□□ -2.17
CHGBP05060 Y_RNA.13-201ENST00000362403 112 ntBASIC1.46□□□□□ -2.18
CHGBP05060 RNU6-242P-201ENST00000384359 107 ntBASIC1.46□□□□□ -2.18
CHGBP05060 AC013244.2-201ENST00000603396 103 ntBASIC1.46□□□□□ -2.18
CHGBP05060 MIR101-2-201ENST00000362195 79 ntBASIC1.45□□□□□ -2.18
CHGBP05060 MIR516A2-201ENST00000384888 90 ntBASIC1.45□□□□□ -2.18
CHGBP05060 MIR516A1-201ENST00000385033 90 ntBASIC1.45□□□□□ -2.18
CHGBP05060 RNU6-994P-201ENST00000410507 111 ntBASIC1.45□□□□□ -2.18
CHGBP05060 RNU6-519P-201ENST00000410590 108 ntBASIC1.45□□□□□ -2.18
CHGBP05060 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
CHGBP05060 RNU7-40P-201ENST00000516397 64 ntBASIC1.45□□□□□ -2.18
CHGBP05060 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
CHGBP05060 AC008163.1-202ENST00000636004 2889 ntBASIC1.44□□□□□ -2.18
CHGBP05060 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHGBP05060 RNU6-571P-201ENST00000384128 107 ntBASIC1.44□□□□□ -2.18
CHGBP05060 RNU6-675P-201ENST00000384236 104 ntBASIC1.44□□□□□ -2.18
CHGBP05060 RNU6-1152P-201ENST00000384576 107 ntBASIC1.44□□□□□ -2.18
CHGBP05060 RNU6-1194P-201ENST00000516208 104 ntBASIC1.44□□□□□ -2.18
CHGBP05060 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
CHGBP05060 SNORD115-27-201ENST00000364430 82 ntBASIC1.43□□□□□ -2.18
CHGBP05060 RNU6-392P-201ENST00000364926 101 ntBASIC1.43□□□□□ -2.18
CHGBP05060 RNU6-1276P-201ENST00000365372 104 ntBASIC1.43□□□□□ -2.18
CHGBP05060 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
CHGBP05060 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
CHGBP05060 MIR96-201ENST00000362288 78 ntBASIC1.42□□□□□ -2.18
CHGBP05060 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
CHGBP05060 RNU7-21P-201ENST00000459430 62 ntBASIC1.42□□□□□ -2.18
CHGBP05060 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.42□□□□□ -2.18
CHGBP05060 MIR5588-201ENST00000581890 63 ntBASIC1.42□□□□□ -2.18
CHGBP05060 MIR6082-201ENST00000613604 109 ntBASIC1.42□□□□□ -2.18
CHGBP05060 AC106800.4-201ENST00000614905 153 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms