Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC107399.1-201ENST00000451226 265 ntBASIC-1.91□□□□□ -2.71
APOBP04114 SNORA40.9-201ENST00000515895 93 ntBASIC-1.91□□□□□ -2.71
APOBP04114 RNU6-74P-201ENST00000384235 107 ntBASIC-1.91□□□□□ -2.72
APOBP04114 SNORD61-201ENST00000384252 73 ntBASIC-1.91□□□□□ -2.72
APOBP04114 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.91□□□□□ -2.72
APOBP04114 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.91□□□□□ -2.72
APOBP04114 SNORA19.3-201ENST00000516165 130 ntBASIC-1.91□□□□□ -2.72
APOBP04114 CYP3A54P-201ENST00000566950 75 ntBASIC-1.91□□□□□ -2.72
APOBP04114 RNU6-495P-201ENST00000362995 107 ntBASIC-1.91□□□□□ -2.72
APOBP04114 RNY3P3-201ENST00000363816 102 ntBASIC-1.91□□□□□ -2.72
APOBP04114 RNU6-260P-201ENST00000384092 107 ntBASIC-1.91□□□□□ -2.72
APOBP04114 RNU6-696P-201ENST00000390834 107 ntBASIC-1.91□□□□□ -2.72
APOBP04114 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.92□□□□□ -2.72
APOBP04114 MTND2P31-201ENST00000512602 616 ntBASIC-1.92□□□□□ -2.72
APOBP04114 MIR5692C2-201ENST00000577959 77 ntBASIC-1.92□□□□□ -2.72
APOBP04114 SNORD27-201ENST00000363981 72 ntBASIC-1.92□□□□□ -2.72
APOBP04114 RNU6-108P-201ENST00000365558 107 ntBASIC-1.92□□□□□ -2.72
APOBP04114 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.92□□□□□ -2.72
APOBP04114 RNU6-155P-201ENST00000516347 100 ntBASIC-1.92□□□□□ -2.72
APOBP04114 RNU7-141P-201ENST00000459304 62 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNU7-87P-201ENST00000459343 62 ntBASIC-1.93□□□□□ -2.72
APOBP04114 SNORA27.2-201ENST00000363365 126 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNU6-879P-201ENST00000364328 108 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNU6-643P-201ENST00000384018 107 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNU6-737P-201ENST00000365370 107 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNU6-345P-201ENST00000517001 107 ntBASIC-1.93□□□□□ -2.72
APOBP04114 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNU6-224P-201ENST00000384055 107 ntBASIC-1.93□□□□□ -2.72
APOBP04114 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.93□□□□□ -2.72
APOBP04114 RNY4P13-201ENST00000384284 96 ntBASIC-1.93□□□□□ -2.72
APOBP04114 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.93□□□□□ -2.72
APOBP04114 AC104996.3-201ENST00000590718 94 ntBASIC-1.93□□□□□ -2.72
APOBP04114 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.94□□□□□ -2.72
APOBP04114 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.94□□□□□ -2.72
APOBP04114 AP003181.2-201ENST00000528941 181 ntBASIC-1.94□□□□□ -2.72
APOBP04114 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.94□□□□□ -2.72
APOBP04114 MIR548N-201ENST00000408742 75 ntBASIC-1.94□□□□□ -2.72
APOBP04114 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.94□□□□□ -2.72
APOBP04114 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.94□□□□□ -2.72
APOBP04114 SNORD50.1-201ENST00000362987 71 ntBASIC-1.94□□□□□ -2.72
APOBP04114 RNU6-191P-201ENST00000516295 94 ntBASIC-1.94□□□□□ -2.72
APOBP04114 SNORA72.4-201ENST00000384174 132 ntBASIC-1.95□□□□□ -2.72
APOBP04114 MIR451A-201ENST00000385059 72 ntBASIC-1.95□□□□□ -2.72
APOBP04114 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.95□□□□□ -2.72
APOBP04114 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.95□□□□□ -2.72
APOBP04114 MTND3P7-201ENST00000474435 343 ntBASIC-1.95□□□□□ -2.72
APOBP04114 RNU2-31P-201ENST00000516954 155 ntBASIC-1.95□□□□□ -2.72
APOBP04114 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.95□□□□□ -2.72
APOBP04114 MTATP6P21-201ENST00000440681 189 ntBASIC-1.95□□□□□ -2.72
APOBP04114 RNA5SP147-201ENST00000516493 109 ntBASIC-1.95□□□□□ -2.72
APOBP04114 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.95□□□□□ -2.72
APOBP04114 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.95□□□□□ -2.72
APOBP04114 SNORD116-25-201ENST00000516517 92 ntBASIC-1.95□□□□□ -2.72
APOBP04114 AC090617.10-201ENST00000624308 134 ntBASIC-1.95□□□□□ -2.72
APOBP04114 SNORA40.2-201ENST00000390847 128 ntBASIC-1.96□□□□□ -2.72
APOBP04114 RNU6-995P-201ENST00000391244 107 ntBASIC-1.96□□□□□ -2.72
APOBP04114 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.96□□□□□ -2.72
APOBP04114 AL118558.2-201ENST00000556294 238 ntBASIC-1.96□□□□□ -2.72
APOBP04114 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.96□□□□□ -2.72
APOBP04114 MIR367-201ENST00000362299 68 ntBASIC-1.96□□□□□ -2.72
APOBP04114 MIR203A-201ENST00000384836 110 ntBASIC-1.96□□□□□ -2.72
APOBP04114 AF228730.3-201ENST00000436691 102 ntBASIC-1.96□□□□□ -2.72
APOBP04114 HULC.1-201ENST00000612720 240 ntBASIC-1.96□□□□□ -2.72
APOBP04114 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.97□□□□□ -2.72
APOBP04114 AC024067.1-201ENST00000426199 223 ntBASIC-1.97□□□□□ -2.72
APOBP04114 AL365205.2-201ENST00000594586 68 ntBASIC-1.97□□□□□ -2.72
APOBP04114 AC006254.2-201ENST00000603259 279 ntBASIC-1.97□□□□□ -2.72
APOBP04114 RNU6-82P-201ENST00000363970 107 ntBASIC-1.97□□□□□ -2.72
APOBP04114 RNU6-318P-201ENST00000384283 103 ntBASIC-1.97□□□□□ -2.72
APOBP04114 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.97□□□□□ -2.72
APOBP04114 MIR3170-201ENST00000582699 77 ntBASIC-1.97□□□□□ -2.72
APOBP04114 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.97□□□□□ -2.72
APOBP04114 MTND4LP7-201ENST00000431728 294 ntBASIC-1.97□□□□□ -2.73
APOBP04114 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.97□□□□□ -2.73
APOBP04114 AL133173.2-201ENST00000614270 90 ntBASIC-1.97□□□□□ -2.73
APOBP04114 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.98□□□□□ -2.73
APOBP04114 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.98□□□□□ -2.73
APOBP04114 AC091951.2-201ENST00000500762 203 ntBASIC-1.98□□□□□ -2.73
APOBP04114 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.98□□□□□ -2.73
APOBP04114 MIR5583-1-201ENST00000580941 59 ntBASIC-1.98□□□□□ -2.73
APOBP04114 MIR376B-201ENST00000614515 100 ntBASIC-1.98□□□□□ -2.73
APOBP04114 RNU6-888P-201ENST00000363010 101 ntBASIC-1.99□□□□□ -2.73
APOBP04114 RNU6-570P-201ENST00000517051 105 ntBASIC-1.99□□□□□ -2.73
APOBP04114 RNU6-660P-201ENST00000364566 109 ntBASIC-1.99□□□□□ -2.73
APOBP04114 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.99□□□□□ -2.73
APOBP04114 SNORD60-201ENST00000383903 83 ntBASIC-1.99□□□□□ -2.73
APOBP04114 RNU6-533P-201ENST00000384144 107 ntBASIC-1.99□□□□□ -2.73
APOBP04114 AL021921.1-201ENST00000442774 93 ntBASIC-1.99□□□□□ -2.73
APOBP04114 SNORA19.2-201ENST00000516013 114 ntBASIC-1.99□□□□□ -2.73
APOBP04114 AC019193.3-201ENST00000609144 554 ntBASIC-1.99□□□□□ -2.73
APOBP04114 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-2□□□□□ -2.73
APOBP04114 Y_RNA.240-201ENST00000364469 95 ntBASIC-2□□□□□ -2.73
APOBP04114 SNORA33.1-201ENST00000364957 130 ntBASIC-2□□□□□ -2.73
APOBP04114 Y_RNA.321-201ENST00000365149 102 ntBASIC-2□□□□□ -2.73
APOBP04114 Y_RNA.521-201ENST00000384560 114 ntBASIC-2□□□□□ -2.73
APOBP04114 MIR581-201ENST00000384895 96 ntBASIC-2□□□□□ -2.73
APOBP04114 RNU6-816P-201ENST00000390914 107 ntBASIC-2□□□□□ -2.73
APOBP04114 RNU6-129P-201ENST00000391022 107 ntBASIC-2□□□□□ -2.73
APOBP04114 Y_RNA.584-201ENST00000391090 114 ntBASIC-2□□□□□ -2.73
APOBP04114 RNU6-1268P-201ENST00000391214 107 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms