Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 RNU6-879P-201ENST00000364328 108 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 RNU6-695P-201ENST00000391157 104 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 SNORD19-201ENST00000391191 68 ntBASIC-1.49□□□□□ -2.65
SPTA1P02549 RNU6-690P-201ENST00000365242 106 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 RNU6-996P-201ENST00000365438 107 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 MIR3123-201ENST00000583417 75 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 MIR3942-201ENST00000585264 109 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 AL365265.1-201ENST00000621045 234 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 SNORA33.1-201ENST00000364957 130 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 AC048344.4-201ENST00000619744 527 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 U6.92-201ENST00000636464 89 ntBASIC-1.5□□□□□ -2.65
SPTA1P02549 MIR628-201ENST00000385229 95 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 FGF7P4-201ENST00000509595 295 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 RNA5SP147-201ENST00000516493 109 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 CYP3A54P-201ENST00000566950 75 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 RNU6-258P-201ENST00000390884 101 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.51□□□□□ -2.65
SPTA1P02549 MRPS35P2-201ENST00000508242 191 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 ZNF519P2-201ENST00000557032 169 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 MIR548O2-201ENST00000616090 70 ntBASIC-1.51□□□□□ -2.65
SPTA1P02549 SNORA63.2-201ENST00000362603 126 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 SNORD42B-201ENST00000458893 67 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.52□□□□□ -2.65
SPTA1P02549 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 RNU6-990P-201ENST00000364385 104 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 RNU6-80P-201ENST00000384195 107 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 RNU6-21P-201ENST00000384710 107 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 MIR203A-201ENST00000384836 110 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 MIR526A2-201ENST00000390198 65 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 RNU6-400P-201ENST00000391173 106 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.52□□□□□ -2.65
SPTA1P02549 AC083798.1-201ENST00000472671 131 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 MIR3915-201ENST00000578518 97 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 AC108081.1-201ENST00000604358 221 ntBASIC-1.52□□□□□ -2.65
SPTA1P02549 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.53□□□□□ -2.65
SPTA1P02549 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.53□□□□□ -2.65
SPTA1P02549 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.53□□□□□ -2.65
SPTA1P02549 MIR548Q-201ENST00000408404 100 ntBASIC-1.53□□□□□ -2.65
SPTA1P02549 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.53□□□□□ -2.65
SPTA1P02549 MIR4528-201ENST00000577763 90 ntBASIC-1.53□□□□□ -2.65
SPTA1P02549 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 RNY3P10-201ENST00000384764 102 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 MTCO2P24-201ENST00000515611 426 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 RNU6-566P-201ENST00000516790 107 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 MIR548AM-201ENST00000584298 74 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 AC040904.1-201ENST00000590850 223 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 AP001362.1-201ENST00000625165 124 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
SPTA1P02549 RNU6-647P-201ENST00000364243 107 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.54□□□□□ -2.66
SPTA1P02549 MTND2P31-201ENST00000512602 616 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 RNU7-110P-201ENST00000516891 62 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 AP002392.1-201ENST00000537692 208 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 MIR466-201ENST00000580653 84 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 AC084781.2-201ENST00000615568 161 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 AC022079.1-201ENST00000621546 602 ntBASIC-1.54□□□□□ -2.66
SPTA1P02549 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 RNU4-24P-201ENST00000364565 139 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 RNU6-373P-201ENST00000411247 98 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 HSPE1P25-201ENST00000455484 251 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 RNU7-154P-201ENST00000516194 62 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 MIR6739-201ENST00000622461 75 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 RNU4-88P-201ENST00000411220 86 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.55□□□□□ -2.66
SPTA1P02549 MIR4509-3-201ENST00000578671 94 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 MIR4509-2-201ENST00000583920 94 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 MIR4509-1-201ENST00000618224 94 ntBASIC-1.55□□□□□ -2.66
SPTA1P02549 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 AC138393.2-201ENST00000414742 246 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 RNU6-168P-201ENST00000516189 101 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 U7.5-201ENST00000517224 61 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.56□□□□□ -2.66
SPTA1P02549 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 SNORA79-201ENST00000408376 140 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 AC068137.3-201ENST00000639191 341 ntBASIC-1.56□□□□□ -2.66
SPTA1P02549 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU6-563P-201ENST00000364872 108 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNY1P6-201ENST00000384193 109 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU6-297P-201ENST00000384636 107 ntBASIC-1.57□□□□□ -2.66
SPTA1P02549 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 383.5 ms