Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MIR3664-201ENST00000579074 99 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 MIR4769-201ENST00000584126 77 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 MIR6082-201ENST00000613604 109 ntBASIC2.42□□□□□ -2.02
HOXA2O43364 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXA2O43364 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXA2O43364 SNORA44.1-201ENST00000517031 108 ntBASIC2.41□□□□□ -2.02
HOXA2O43364 MIR3937-201ENST00000580135 106 ntBASIC2.41□□□□□ -2.02
HOXA2O43364 TRDV1-202ENST00000621643 102 ntBASIC2.41□□□□□ -2.02
HOXA2O43364 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
HOXA2O43364 MIR302D-201ENST00000362275 68 ntBASIC2.4□□□□□ -2.03
HOXA2O43364 Y_RNA.13-201ENST00000362403 112 ntBASIC2.4□□□□□ -2.03
HOXA2O43364 RNU6-1260P-201ENST00000362944 107 ntBASIC2.4□□□□□ -2.03
HOXA2O43364 Y_RNA.239-201ENST00000364444 113 ntBASIC2.4□□□□□ -2.03
HOXA2O43364 RNU6-1015P-201ENST00000517121 99 ntBASIC2.4□□□□□ -2.03
HOXA2O43364 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA2O43364 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HOXA2O43364 RNY4P3-201ENST00000365254 95 ntBASIC2.39□□□□□ -2.03
HOXA2O43364 MIR30A-201ENST00000385092 71 ntBASIC2.39□□□□□ -2.03
HOXA2O43364 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
HOXA2O43364 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
HOXA2O43364 RNU6-765P-201ENST00000516916 99 ntBASIC2.39□□□□□ -2.03
HOXA2O43364 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA2O43364 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXA2O43364 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA2O43364 Y_RNA.12-201ENST00000362393 112 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 SNORD1A-201ENST00000364968 72 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 SNORA64-201ENST00000384674 134 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 SNORA48.3-201ENST00000391081 134 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 RPS27P16-201ENST00000425758 201 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 AC092628.1-201ENST00000436250 252 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 YWHAEP2-201ENST00000580066 112 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 YWHAEP3-201ENST00000582767 121 ntBASIC2.38□□□□□ -2.03
HOXA2O43364 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HOXA2O43364 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HOXA2O43364 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HOXA2O43364 SNORD83.1-201ENST00000411362 77 ntBASIC2.37□□□□□ -2.03
HOXA2O43364 AL591806.2-201ENST00000433122 173 ntBASIC2.37□□□□□ -2.03
HOXA2O43364 AC097635.1-201ENST00000450678 155 ntBASIC2.37□□□□□ -2.03
HOXA2O43364 HMGN2P23-201ENST00000456759 269 ntBASIC2.37□□□□□ -2.03
HOXA2O43364 AC103810.8-201ENST00000607347 118 ntBASIC2.37□□□□□ -2.03
HOXA2O43364 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HOXA2O43364 RNU6-1051P-201ENST00000365471 102 ntBASIC2.36□□□□□ -2.03
HOXA2O43364 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HOXA2O43364 SNORD90-201ENST00000391145 111 ntBASIC2.36□□□□□ -2.03
HOXA2O43364 AC074348.1-201ENST00000426503 132 ntBASIC2.36□□□□□ -2.03
HOXA2O43364 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXA2O43364 snoU13.21-201ENST00000459368 105 ntBASIC2.36□□□□□ -2.03
HOXA2O43364 AC015712.3-201ENST00000559380 164 ntBASIC2.36□□□□□ -2.03
HOXA2O43364 SNORD113.3-201ENST00000364630 78 ntBASIC2.35□□□□□ -2.03
HOXA2O43364 RNU6-934P-201ENST00000365154 107 ntBASIC2.35□□□□□ -2.03
HOXA2O43364 Y_RNA.330-201ENST00000365230 109 ntBASIC2.35□□□□□ -2.03
HOXA2O43364 SNORD101-201ENST00000384027 73 ntBASIC2.35□□□□□ -2.03
HOXA2O43364 Y_RNA.697-201ENST00000516776 113 ntBASIC2.35□□□□□ -2.03
HOXA2O43364 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA2O43364 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA2O43364 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
HOXA2O43364 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.03
HOXA2O43364 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
HOXA2O43364 RNU6-482P-201ENST00000391068 107 ntBASIC2.34□□□□□ -2.03
HOXA2O43364 AL606490.4-201ENST00000423117 127 ntBASIC2.34□□□□□ -2.03
HOXA2O43364 RNU6-634P-201ENST00000459134 106 ntBASIC2.34□□□□□ -2.03
HOXA2O43364 RNU6-165P-201ENST00000517170 99 ntBASIC2.34□□□□□ -2.03
HOXA2O43364 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HOXA2O43364 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HOXA2O43364 RNU6-664P-201ENST00000362381 107 ntBASIC2.33□□□□□ -2.04
HOXA2O43364 RNU6-587P-201ENST00000391282 106 ntBASIC2.33□□□□□ -2.04
HOXA2O43364 RNA5SP489-201ENST00000410986 109 ntBASIC2.33□□□□□ -2.04
HOXA2O43364 RNU6-687P-201ENST00000516443 89 ntBASIC2.33□□□□□ -2.04
HOXA2O43364 AC138907.6-201ENST00000568401 126 ntBASIC2.33□□□□□ -2.04
HOXA2O43364 AC138869.1-201ENST00000568623 124 ntBASIC2.33□□□□□ -2.04
HOXA2O43364 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXA2O43364 Y_RNA.42-201ENST00000362660 108 ntBASIC2.32□□□□□ -2.04
HOXA2O43364 MIR125B2-201ENST00000385128 89 ntBASIC2.32□□□□□ -2.04
HOXA2O43364 MIR4771-2-201ENST00000577758 74 ntBASIC2.32□□□□□ -2.04
HOXA2O43364 MIR4771-1-201ENST00000582617 74 ntBASIC2.32□□□□□ -2.04
HOXA2O43364 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.32□□□□□ -2.04
HOXA2O43364 Y_RNA.207-201ENST00000364142 106 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 MIR764-201ENST00000390811 85 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 Y_RNA.596-201ENST00000410462 109 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 RNU6-1054P-201ENST00000411293 104 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 AL512310.8-201ENST00000550183 120 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 MIR4696-201ENST00000581431 70 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 U6.100-201ENST00000636230 99 ntBASIC2.31□□□□□ -2.04
HOXA2O43364 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HOXA2O43364 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HOXA2O43364 MIR6073-201ENST00000352083 89 ntBASIC2.3□□□□□ -2.04
HOXA2O43364 MIR599-201ENST00000385069 95 ntBASIC2.3□□□□□ -2.04
HOXA2O43364 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HOXA2O43364 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA2O43364 SNORA8.1-201ENST00000384250 140 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HOXA2O43364 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 snoU13.17-201ENST00000458802 104 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 AC125388.1-201ENST00000459631 156 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 AC036111.3-201ENST00000526389 112 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 MIR3198-2-201ENST00000577868 80 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.29□□□□□ -2.04
HOXA2O43364 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA2O43364 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms