Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 AP001362.1-201ENST00000625165 124 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 SNORD114-29-201ENST00000364819 70 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 RNU6-690P-201ENST00000365242 106 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 MIR617-201ENST00000385030 97 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 MIR548S-201ENST00000581352 82 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.71□□□□□ -2.52
CLOCKO15516 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 MIR9-2-201ENST00000384838 87 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 MT-TQ-201ENST00000387372 72 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 RNU4-69P-201ENST00000410677 143 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.72□□□□□ -2.52
CLOCKO15516 RNU7-106P-201ENST00000459514 67 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.72□□□□□ -2.52
CLOCKO15516 RNU6-154P-201ENST00000384306 106 ntBASIC-0.73□□□□□ -2.53
CLOCKO15516 RNU6-578P-201ENST00000390980 103 ntBASIC-0.73□□□□□ -2.53
CLOCKO15516 AC022028.1-201ENST00000412054 408 ntBASIC-0.73□□□□□ -2.53
CLOCKO15516 AC093726.3-201ENST00000637588 150 ntBASIC-0.73□□□□□ -2.53
CLOCKO15516 MIR335-201ENST00000362173 94 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 RNU6-47P-201ENST00000383866 107 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 RNU6-643P-201ENST00000384018 107 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 RNU6-571P-201ENST00000384128 107 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 MIR4680-201ENST00000580906 66 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 RNU2-4P-201ENST00000606190 192 ntBASIC-0.74□□□□□ -2.53
CLOCKO15516 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 SNORD115-44-201ENST00000365391 82 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 RNU6-472P-201ENST00000384299 107 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 MIR2113-201ENST00000459007 91 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 AC074198.2-201ENST00000508153 258 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 RNU7-123P-201ENST00000515911 60 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 RNU7-2P-201ENST00000516096 62 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 RNU6-240P-201ENST00000516098 97 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 MIR4460-201ENST00000577862 86 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 AC011603.4-201ENST00000611325 277 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 MIR376B-201ENST00000614515 100 ntBASIC-0.75□□□□□ -2.53
CLOCKO15516 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.76□□□□□ -2.53
CLOCKO15516 SNORA51.5-201ENST00000384126 131 ntBASIC-0.76□□□□□ -2.53
CLOCKO15516 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.76□□□□□ -2.53
CLOCKO15516 AC009779.6-201ENST00000603972 165 ntBASIC-0.76□□□□□ -2.53
CLOCKO15516 AC021443.1-201ENST00000604478 211 ntBASIC-0.76□□□□□ -2.53
CLOCKO15516 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.76□□□□□ -2.53
CLOCKO15516 AC134503.1-201ENST00000633048 54 ntBASIC-0.76□□□□□ -2.53
CLOCKO15516 MTND4P29-201ENST00000503122 1372 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 MT-TY-201ENST00000387409 66 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 RNU4-63P-201ENST00000411313 118 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 RNU7-164P-201ENST00000459221 62 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 AL160413.1-201ENST00000622780 310 ntBASIC-0.77□□□□□ -2.53
CLOCKO15516 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.78□□□□□ -2.53
CLOCKO15516 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.78□□□□□ -2.53
CLOCKO15516 SNORD56B-201ENST00000384713 71 ntBASIC-0.78□□□□□ -2.53
CLOCKO15516 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.78□□□□□ -2.53
CLOCKO15516 RNU6-850P-201ENST00000516934 103 ntBASIC-0.78□□□□□ -2.53
CLOCKO15516 AC138907.4-201ENST00000570107 226 ntBASIC-0.78□□□□□ -2.53
CLOCKO15516 RNY3P14-201ENST00000384309 102 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 RNU6-900P-201ENST00000384498 102 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 MIR516A2-201ENST00000384888 90 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 MIR516A1-201ENST00000385033 90 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 SNORD77B-201ENST00000391112 67 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 AL445193.1-201ENST00000441183 141 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 RNU6-287P-201ENST00000516230 98 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 MIR4643-201ENST00000577473 78 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 MIR548AX-201ENST00000580117 73 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 AC087741.2-201ENST00000619415 172 ntBASIC-0.79□□□□□ -2.54
CLOCKO15516 MIR20A-201ENST00000362279 71 ntBASIC-0.8□□□□□ -2.54
CLOCKO15516 RNU6-616P-201ENST00000384353 107 ntBASIC-0.8□□□□□ -2.54
CLOCKO15516 RNY3P16-201ENST00000516338 101 ntBASIC-0.8□□□□□ -2.54
CLOCKO15516 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 SNORD115-35-201ENST00000365122 82 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 MIR34C-201ENST00000384831 77 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 MIR548P-201ENST00000408336 84 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 AP000676.1-201ENST00000533307 52 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 AC007012.1-201ENST00000567192 175 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 MIR4280-201ENST00000582178 76 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 AC145423.2-201ENST00000610631 239 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 U4.1-201ENST00000620349 87 ntBASIC-0.81□□□□□ -2.54
CLOCKO15516 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.82□□□□□ -2.54
CLOCKO15516 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.82□□□□□ -2.54
CLOCKO15516 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.82□□□□□ -2.54
CLOCKO15516 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.82□□□□□ -2.54
CLOCKO15516 RNY1P7-201ENST00000384743 110 ntBASIC-0.82□□□□□ -2.54
CLOCKO15516 RNU6-713P-201ENST00000384761 107 ntBASIC-0.82□□□□□ -2.54
CLOCKO15516 SNORA49-201ENST00000386157 136 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms