Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
CDX4O14627 RNU6-313P-201ENST00000516317 112 ntBASIC0.59□□□□□ -2.31
CDX4O14627 RNU6-479P-201ENST00000516348 105 ntBASIC0.59□□□□□ -2.31
CDX4O14627 SNORA25.16-201ENST00000516741 121 ntBASIC0.59□□□□□ -2.31
CDX4O14627 AC007012.1-201ENST00000567192 175 ntBASIC0.59□□□□□ -2.31
CDX4O14627 MTND5P34-201ENST00000568888 325 ntBASIC0.59□□□□□ -2.31
CDX4O14627 AC008608.1-201ENST00000603910 127 ntBASIC0.59□□□□□ -2.31
CDX4O14627 Y_RNA.13-201ENST00000362403 112 ntBASIC0.58□□□□□ -2.32
CDX4O14627 SNORD115-19-201ENST00000363098 82 ntBASIC0.58□□□□□ -2.32
CDX4O14627 SNORD115-18-201ENST00000363293 82 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNA5SP133-201ENST00000363368 119 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
CDX4O14627 SNORD115-17-201ENST00000364612 82 ntBASIC0.58□□□□□ -2.32
CDX4O14627 Y_RNA.362-201ENST00000365518 110 ntBASIC0.58□□□□□ -2.32
CDX4O14627 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CDX4O14627 Y_RNA.448-201ENST00000384185 108 ntBASIC0.58□□□□□ -2.32
CDX4O14627 SNORA72.6-201ENST00000384520 129 ntBASIC0.58□□□□□ -2.32
CDX4O14627 MIR520H-201ENST00000385126 88 ntBASIC0.58□□□□□ -2.32
CDX4O14627 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNU2-51P-201ENST00000410708 197 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNU7-2P-201ENST00000516096 62 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
CDX4O14627 RNU6-521P-201ENST00000516663 105 ntBASIC0.58□□□□□ -2.32
CDX4O14627 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.58□□□□□ -2.32
CDX4O14627 AL670379.3-201ENST00000605040 251 ntBASIC0.58□□□□□ -2.32
CDX4O14627 AL035470.1-201ENST00000622571 220 ntBASIC0.58□□□□□ -2.32
CDX4O14627 U6.109-201ENST00000636749 87 ntBASIC0.58□□□□□ -2.32
CDX4O14627 SNORA63.5-201ENST00000363548 123 ntBASIC0.57□□□□□ -2.32
CDX4O14627 SNORD115-35-201ENST00000365122 82 ntBASIC0.57□□□□□ -2.32
CDX4O14627 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-447P-201ENST00000410293 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-1118P-201ENST00000410382 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-1076P-201ENST00000410397 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-355P-201ENST00000410427 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-791P-201ENST00000410467 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-705P-201ENST00000410601 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 SNORA7.5-201ENST00000410672 110 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-1100P-201ENST00000410691 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-860P-201ENST00000410860 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-1217P-201ENST00000411276 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-785P-201ENST00000411324 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 RNU6-531P-201ENST00000516694 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 AC138749.4-201ENST00000563970 127 ntBASIC0.57□□□□□ -2.32
CDX4O14627 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.57□□□□□ -2.32
CDX4O14627 SNORD92-201ENST00000585078 85 ntBASIC0.57□□□□□ -2.32
CDX4O14627 U6.90-201ENST00000614007 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 MIR8066-201ENST00000617280 78 ntBASIC0.57□□□□□ -2.32
CDX4O14627 U6.70-201ENST00000620287 104 ntBASIC0.57□□□□□ -2.32
CDX4O14627 Y_RNA.119-201ENST00000363301 96 ntBASIC0.56□□□□□ -2.32
CDX4O14627 RNU1-119P-201ENST00000391122 165 ntBASIC0.56□□□□□ -2.32
CDX4O14627 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
CDX4O14627 RNU7-48P-201ENST00000458875 63 ntBASIC0.56□□□□□ -2.32
CDX4O14627 RNA5SP476-201ENST00000516613 103 ntBASIC0.56□□□□□ -2.32
CDX4O14627 DEFB131E-201ENST00000532329 154 ntBASIC0.56□□□□□ -2.32
CDX4O14627 MIR6082-201ENST00000613604 109 ntBASIC0.56□□□□□ -2.32
CDX4O14627 MIR6129-201ENST00000616087 109 ntBASIC0.56□□□□□ -2.32
CDX4O14627 Y_RNA.35-201ENST00000362601 101 ntBASIC0.55□□□□□ -2.32
CDX4O14627 Y_RNA.42-201ENST00000362660 108 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-363P-201ENST00000362895 105 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU4-67P-201ENST00000364569 141 ntBASIC0.55□□□□□ -2.32
CDX4O14627 Y_RNA.328-201ENST00000365208 113 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-1144P-201ENST00000384247 104 ntBASIC0.55□□□□□ -2.32
CDX4O14627 SNORD116-21-201ENST00000384507 92 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-816P-201ENST00000390914 107 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-679P-201ENST00000391003 106 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-1268P-201ENST00000391214 107 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-1239P-201ENST00000391310 107 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-1064P-201ENST00000410626 104 ntBASIC0.55□□□□□ -2.32
CDX4O14627 MIR4679-2-201ENST00000578358 77 ntBASIC0.55□□□□□ -2.32
CDX4O14627 MIR376B-201ENST00000614515 100 ntBASIC0.55□□□□□ -2.32
CDX4O14627 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
CDX4O14627 RNU6-1290P-201ENST00000362957 109 ntBASIC0.54□□□□□ -2.32
CDX4O14627 Y_RNA.98-201ENST00000363109 102 ntBASIC0.54□□□□□ -2.32
CDX4O14627 Y_RNA.155-201ENST00000363632 101 ntBASIC0.54□□□□□ -2.32
CDX4O14627 RNU6-865P-201ENST00000364772 107 ntBASIC0.54□□□□□ -2.32
CDX4O14627 RNY1P2-201ENST00000364820 117 ntBASIC0.54□□□□□ -2.32
CDX4O14627 RNU6-429P-201ENST00000384582 108 ntBASIC0.54□□□□□ -2.32
CDX4O14627 RNU6-476P-201ENST00000384726 107 ntBASIC0.54□□□□□ -2.32
CDX4O14627 MIR34C-201ENST00000384831 77 ntBASIC0.54□□□□□ -2.32
CDX4O14627 MIR548I2-201ENST00000408348 149 ntBASIC0.54□□□□□ -2.32
CDX4O14627 AL353813.1-201ENST00000440700 253 ntBASIC0.54□□□□□ -2.32
CDX4O14627 RPL39P34-201ENST00000477141 156 ntBASIC0.54□□□□□ -2.32
CDX4O14627 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
CDX4O14627 MIR4500-201ENST00000579472 76 ntBASIC0.54□□□□□ -2.32
CDX4O14627 AL162726.3-218ENST00000636401 95 ntBASIC0.54□□□□□ -2.32
CDX4O14627 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CDX4O14627 RNU6-409P-201ENST00000384114 104 ntBASIC0.53□□□□□ -2.32
CDX4O14627 Y_RNA.507-201ENST00000384500 99 ntBASIC0.53□□□□□ -2.32
CDX4O14627 RNU6-1081P-201ENST00000384537 107 ntBASIC0.53□□□□□ -2.32
CDX4O14627 AC244098.3-201ENST00000424803 96 ntBASIC0.53□□□□□ -2.32
CDX4O14627 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
CDX4O14627 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.53□□□□□ -2.32
CDX4O14627 AL512310.12-203ENST00000640543 90 ntBASIC0.53□□□□□ -2.32
CDX4O14627 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
CDX4O14627 RNU4-58P-201ENST00000363192 141 ntBASIC0.52□□□□□ -2.33
CDX4O14627 Y_RNA.291-201ENST00000364886 113 ntBASIC0.52□□□□□ -2.33
CDX4O14627 U8.6-201ENST00000364939 135 ntBASIC0.52□□□□□ -2.33
CDX4O14627 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
CDX4O14627 Y_RNA.360-201ENST00000365512 102 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 313.1 ms