Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL157777.2-201ENST00000258070 137 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.198-201ENST00000364013 98 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 SNORD100-201ENST00000408573 76 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 SNORA7.5-201ENST00000410672 110 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 RNU6-659P-201ENST00000516454 104 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 RNU6-521P-201ENST00000516663 105 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.51□□□□□ -2.33
TRIM49BA6NDI0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 SNORD114-10-201ENST00000363409 72 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 MIR548D2-201ENST00000384955 97 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 MIR548A1-201ENST00000385041 97 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 RNU7-48P-201ENST00000458875 63 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 RNU6-1333P-201ENST00000516162 93 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 MIR3678-201ENST00000578455 94 ntBASIC0.5□□□□□ -2.33
TRIM49BA6NDI0 SNORD115-19-201ENST00000363098 82 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 SNORD115-18-201ENST00000363293 82 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 SNORD115-17-201ENST00000364612 82 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 RNU6-535P-201ENST00000384722 107 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 RNU6-1194P-201ENST00000516208 104 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 MIR4500-201ENST00000579472 76 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 MIR3163-201ENST00000581592 73 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 MIR3914-2-201ENST00000637339 95 ntBASIC0.49□□□□□ -2.33
TRIM49BA6NDI0 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 SNORD115-35-201ENST00000365122 82 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.362-201ENST00000365518 110 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 MIR193B-201ENST00000384907 83 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 SNORD77B-201ENST00000391112 67 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
TRIM49BA6NDI0 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.213-201ENST00000364178 111 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 SNORD116-14-201ENST00000383894 92 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 SNORD116-17-201ENST00000383929 92 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 RNU6-80P-201ENST00000384195 107 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 SNORD116-15-201ENST00000384445 92 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 SNORD116-19-201ENST00000384729 92 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 TRAJ51-201ENST00000504127 63 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 MIR3910-1-201ENST00000580936 111 ntBASIC0.47□□□□□ -2.33
TRIM49BA6NDI0 Y_RNA.127-201ENST00000363386 109 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.299-201ENST00000364973 94 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 SNORD50.2-201ENST00000365465 70 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 RNU6-959P-201ENST00000384671 107 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 RNA5SP136-201ENST00000410906 107 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 RNU6-765P-201ENST00000516916 99 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.712-201ENST00000517011 92 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 AC010487.4-201ENST00000637027 61 ntBASIC0.46□□□□□ -2.34
TRIM49BA6NDI0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 RNU4-58P-201ENST00000363192 141 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 RNU4-67P-201ENST00000364569 141 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 RNU6-865P-201ENST00000364772 107 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 RNA5SP117-201ENST00000365294 118 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.353-201ENST00000365440 108 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 MIR759-201ENST00000390224 91 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 RNU6-1006P-201ENST00000516998 103 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 AP003327.1-201ENST00000529684 127 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 MIR3613-201ENST00000579844 87 ntBASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.45□□□□□ -2.34
TRIM49BA6NDI0 MIR539-201ENST00000365690 78 ntBASIC0.44□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.649-201ENST00000459077 103 ntBASIC0.44□□□□□ -2.34
TRIM49BA6NDI0 AP001362.1-201ENST00000625165 124 ntBASIC0.44□□□□□ -2.34
TRIM49BA6NDI0 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.360-201ENST00000365512 102 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 RNU6-816P-201ENST00000390914 107 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 RNU6-1268P-201ENST00000391214 107 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 RNU6-1239P-201ENST00000391310 107 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 AL603908.1-201ENST00000406098 201 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 RNU7-106P-201ENST00000459514 67 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
TRIM49BA6NDI0 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 MIR101-2-201ENST00000362195 79 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.49-201ENST00000362714 112 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 RNU6-81P-201ENST00000365608 104 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 SNORA8.2-201ENST00000384372 139 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 SNORA19.1-201ENST00000410656 129 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 TMSB4XP3-201ENST00000445144 114 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 RNU7-195P-201ENST00000458793 62 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 AC007012.1-201ENST00000567192 175 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 MIR4752-201ENST00000579672 72 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 MIR7107-201ENST00000611489 80 ntBASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.98-201ENST00000363109 102 ntBASIC0.41□□□□□ -2.34
TRIM49BA6NDI0 Y_RNA.155-201ENST00000363632 101 ntBASIC0.41□□□□□ -2.34
TRIM49BA6NDI0 RNU6-429P-201ENST00000384582 108 ntBASIC0.41□□□□□ -2.34
TRIM49BA6NDI0 AL161932.1-201ENST00000437408 146 ntBASIC0.41□□□□□ -2.34
TRIM49BA6NDI0 SNRPGP12-201ENST00000449481 213 ntBASIC0.41□□□□□ -2.34
TRIM49BA6NDI0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms