Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
CAPN6Q9Y6Q1 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
CAPN6Q9Y6Q1 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
CAPN6Q9Y6Q1 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
CAPN6Q9Y6Q1 AL512598.1-201ENST00000610158 273 ntBASIC1.84□□□□□ -2.11
CAPN6Q9Y6Q1 SNORD1A-201ENST00000364968 72 ntBASIC1.83□□□□□ -2.12
CAPN6Q9Y6Q1 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
CAPN6Q9Y6Q1 RNA5SP95-201ENST00000410319 137 ntBASIC1.83□□□□□ -2.12
CAPN6Q9Y6Q1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.83□□□□□ -2.12
CAPN6Q9Y6Q1 MIR4435-1-201ENST00000582552 80 ntBASIC1.83□□□□□ -2.12
CAPN6Q9Y6Q1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 AL161722.3-201ENST00000605789 2983 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 Y_RNA.221-201ENST00000364248 96 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6-53P-201ENST00000365367 106 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 MIR1236-201ENST00000408340 102 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 SNORD4B-201ENST00000459083 72 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CAPN6Q9Y6Q1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 SNORD93-201ENST00000408813 74 ntBASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 MIR18B-201ENST00000454574 71 ntBASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 AC019288.1-201ENST00000557918 224 ntBASIC1.81□□□□□ -2.12
CAPN6Q9Y6Q1 RNU4-58P-201ENST00000363192 141 ntBASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 RNU4-32P-201ENST00000363404 141 ntBASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6-580P-201ENST00000365159 107 ntBASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 SNORA72.6-201ENST00000384520 129 ntBASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 MIR4491-201ENST00000581087 68 ntBASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
CAPN6Q9Y6Q1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 RNA5SP508-201ENST00000411327 119 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 RNU7-85P-201ENST00000458851 63 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 AC023790.1-201ENST00000482174 347 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6-531P-201ENST00000516694 104 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 AC140658.3-201ENST00000567603 271 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 MIR3664-201ENST00000579074 99 ntBASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6-1296P-201ENST00000383879 107 ntBASIC1.78□□□□□ -2.12
CAPN6Q9Y6Q1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.78□□□□□ -2.12
CAPN6Q9Y6Q1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.78□□□□□ -2.12
CAPN6Q9Y6Q1 SNORA25.16-201ENST00000516741 121 ntBASIC1.78□□□□□ -2.12
CAPN6Q9Y6Q1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 Y_RNA.94-201ENST00000363068 106 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-403P-201ENST00000363163 104 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 RNA5SP126-201ENST00000365092 109 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 RNU1-36P-201ENST00000365130 165 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 MIR516A2-201ENST00000384888 90 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 MIR516A1-201ENST00000385033 90 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 RNU7-153P-201ENST00000516455 62 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 MIR4712-201ENST00000583750 82 ntBASIC1.77□□□□□ -2.13
CAPN6Q9Y6Q1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-243P-201ENST00000391140 107 ntBASIC1.76□□□□□ -2.13
CAPN6Q9Y6Q1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.76□□□□□ -2.13
CAPN6Q9Y6Q1 MIR4662A-201ENST00000637499 67 ntBASIC1.76□□□□□ -2.13
CAPN6Q9Y6Q1 AC023934.1-201ENST00000574529 2389 ntBASIC1.76□□□□□ -2.13
CAPN6Q9Y6Q1 SNORD36A-201ENST00000362874 73 ntBASIC1.75□□□□□ -2.13
CAPN6Q9Y6Q1 snoU13.11-201ENST00000459219 104 ntBASIC1.75□□□□□ -2.13
CAPN6Q9Y6Q1 RPL23AP94-201ENST00000512518 302 ntBASIC1.75□□□□□ -2.13
CAPN6Q9Y6Q1 SNORA25.13-201ENST00000516395 103 ntBASIC1.75□□□□□ -2.13
CAPN6Q9Y6Q1 AL512310.8-201ENST00000550183 120 ntBASIC1.75□□□□□ -2.13
CAPN6Q9Y6Q1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-65P-201ENST00000516332 98 ntBASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 MIR3198-2-201ENST00000577868 80 ntBASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 MIR4536-1-201ENST00000583537 88 ntBASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CAPN6Q9Y6Q1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 MIR1257-201ENST00000408490 117 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 RNU7-185P-201ENST00000459215 60 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 snoU13.21-201ENST00000459368 105 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 MIR4648-201ENST00000580107 72 ntBASIC1.73□□□□□ -2.13
CAPN6Q9Y6Q1 MIR101-2-201ENST00000362195 79 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 Y_RNA.283-201ENST00000364798 112 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-811P-201ENST00000384069 107 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 RNU6-466P-201ENST00000391224 103 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 SNORD63B-201ENST00000411005 70 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 SNORD83.1-201ENST00000411362 77 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 RNU7-106P-201ENST00000459514 67 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
CAPN6Q9Y6Q1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CAPN6Q9Y6Q1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
CAPN6Q9Y6Q1 RNU6-315P-201ENST00000362666 107 ntBASIC1.71□□□□□ -2.14
CAPN6Q9Y6Q1 RNU6-776P-201ENST00000364403 104 ntBASIC1.71□□□□□ -2.14
CAPN6Q9Y6Q1 SNORD113.3-201ENST00000364630 78 ntBASIC1.71□□□□□ -2.14
CAPN6Q9Y6Q1 RNU6-1022P-201ENST00000365049 104 ntBASIC1.71□□□□□ -2.14
CAPN6Q9Y6Q1 RNU6-129P-201ENST00000391022 107 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms