Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB13Q9Y5F0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB13Q9Y5F0 RNU6-1335P-201ENST00000365426 107 ntBASIC3.17□□□□□ -1.9
PCDHB13Q9Y5F0 MIR1257-201ENST00000408490 117 ntBASIC3.17□□□□□ -1.9
PCDHB13Q9Y5F0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
PCDHB13Q9Y5F0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 MIR512-1-201ENST00000384913 84 ntBASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 AC015688.6-201ENST00000577737 104 ntBASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 MIR4658-201ENST00000584344 65 ntBASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PCDHB13Q9Y5F0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.9
PCDHB13Q9Y5F0 RNU6-936P-201ENST00000384005 107 ntBASIC3.15□□□□□ -1.91
PCDHB13Q9Y5F0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHB13Q9Y5F0 MIR4529-201ENST00000578110 78 ntBASIC3.15□□□□□ -1.91
PCDHB13Q9Y5F0 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
PCDHB13Q9Y5F0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDHB13Q9Y5F0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 AL596028.1-201ENST00000326971 197 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 MIR103A2-201ENST00000362154 78 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 SNORA44-201ENST00000384584 132 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 SNORD75.2-201ENST00000408784 58 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 SCARNA21.1-201ENST00000515996 128 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 RNU6-287P-201ENST00000516230 98 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 RNU6-947P-201ENST00000516264 106 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 AC103810.8-201ENST00000607347 118 ntBASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB13Q9Y5F0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHB13Q9Y5F0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB13Q9Y5F0 RNU6-56P-201ENST00000516986 93 ntBASIC3.13□□□□□ -1.91
PCDHB13Q9Y5F0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHB13Q9Y5F0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB13Q9Y5F0 ZNF658B-202ENST00000615961 3375 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 RNA5SP264-201ENST00000363115 107 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 SNORD56.5-201ENST00000364281 72 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 SNORA31.25-201ENST00000517242 134 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 AC073869.9-201ENST00000641610 120 ntBASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB13Q9Y5F0 RNA5SP117-201ENST00000365294 118 ntBASIC3.11□□□□□ -1.91
PCDHB13Q9Y5F0 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
PCDHB13Q9Y5F0 RPS29P6-201ENST00000438196 145 ntBASIC3.11□□□□□ -1.91
PCDHB13Q9Y5F0 RNU7-24P-201ENST00000458867 62 ntBASIC3.11□□□□□ -1.91
PCDHB13Q9Y5F0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHB13Q9Y5F0 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
PCDHB13Q9Y5F0 RNU6-1039P-201ENST00000383931 107 ntBASIC3.1□□□□□ -1.91
PCDHB13Q9Y5F0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PCDHB13Q9Y5F0 RPL23AP42-201ENST00000471152 471 ntBASIC3.1□□□□□ -1.91
PCDHB13Q9Y5F0 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
PCDHB13Q9Y5F0 RNU6-1184P-201ENST00000384588 108 ntBASIC3.09□□□□□ -1.91
PCDHB13Q9Y5F0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHB13Q9Y5F0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.09□□□□□ -1.91
PCDHB13Q9Y5F0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PCDHB13Q9Y5F0 SNORD115-44-201ENST00000365391 82 ntBASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 snoU13.21-201ENST00000459368 105 ntBASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 MIR3605-201ENST00000583214 100 ntBASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 MIR6509-201ENST00000614603 85 ntBASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHB13Q9Y5F0 SNORD113-4-201ENST00000364802 75 ntBASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 RNA5SP492-201ENST00000411330 114 ntBASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHB13Q9Y5F0 AL359851.1-201ENST00000569460 4997 ntBASIC3.06□□□□□ -1.92
PCDHB13Q9Y5F0 RNU6-495P-201ENST00000362995 107 ntBASIC3.06□□□□□ -1.92
PCDHB13Q9Y5F0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHB13Q9Y5F0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 RNA5SP245-201ENST00000364239 121 ntBASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PCDHB13Q9Y5F0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PCDHB13Q9Y5F0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHB13Q9Y5F0 RNU6-645P-201ENST00000364649 106 ntBASIC3.04□□□□□ -1.92
PCDHB13Q9Y5F0 SNORD83.1-201ENST00000411362 77 ntBASIC3.04□□□□□ -1.92
PCDHB13Q9Y5F0 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
PCDHB13Q9Y5F0 MIR3938-201ENST00000582157 103 ntBASIC3.04□□□□□ -1.92
PCDHB13Q9Y5F0 RNU6-535P-201ENST00000384722 107 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 MIR203A-201ENST00000384836 110 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 MIR125B2-201ENST00000385128 89 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 RNA5SP299-201ENST00000391203 116 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 AL138827.1-201ENST00000402666 306 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 AL359511.1-201ENST00000402970 211 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 NAMPTP3-201ENST00000569273 224 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 MIR4513-201ENST00000581077 86 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 AC006386.2-201ENST00000624491 75 ntBASIC3.03□□□□□ -1.92
PCDHB13Q9Y5F0 AC012005.1-201ENST00000624575 75 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms