Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 Y_RNA.705-201ENST00000516862 110 ntBASIC1.72□□□□□ -2.13
PTPN22Q9Y2R2 AC026421.1-201ENST00000519101 163 ntBASIC1.72□□□□□ -2.13
PTPN22Q9Y2R2 AP003716.2-201ENST00000528260 108 ntBASIC1.72□□□□□ -2.13
PTPN22Q9Y2R2 PRELID3BP2-201ENST00000605362 201 ntBASIC1.72□□□□□ -2.13
PTPN22Q9Y2R2 MIR520E-201ENST00000384867 87 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 MT-TN-201ENST00000387400 73 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-972P-201ENST00000391208 107 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 RNY4P29-201ENST00000410801 97 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-762P-201ENST00000517107 102 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 AL662814.1-201ENST00000617364 121 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 AC091304.10-201ENST00000641554 121 ntBASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PTPN22Q9Y2R2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 RNY1P13-201ENST00000365030 105 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 MIR563-201ENST00000385080 79 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 SNORA26.2-201ENST00000390922 122 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-887P-201ENST00000410660 100 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 AC244023.1-201ENST00000426884 112 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 snoU13.2-201ENST00000459201 104 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 RN7SKP88-201ENST00000516847 250 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 RNU11-2P-201ENST00000516898 142 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 AL512310.8-201ENST00000550183 120 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 AC141846.1-201ENST00000568348 142 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 AC242498.1-201ENST00000604134 111 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 7SK.8-201ENST00000612110 250 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 7SK.11-201ENST00000615477 250 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 U7.3-201ENST00000616123 62 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 7SK.13-201ENST00000622040 250 ntBASIC1.7□□□□□ -2.14
PTPN22Q9Y2R2 Y_RNA.98-201ENST00000363109 102 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-396P-201ENST00000365369 105 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-820P-201ENST00000384273 107 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 AL133373.1-201ENST00000497098 94 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-947P-201ENST00000516264 106 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 MIR4264-201ENST00000583520 66 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 MIR548Z-201ENST00000584743 97 ntBASIC1.69□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-865P-201ENST00000364772 107 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 Y_RNA.448-201ENST00000384185 108 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-813P-201ENST00000384691 107 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 MIR34C-201ENST00000384831 77 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 MIR450A2-201ENST00000385022 100 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-1321P-201ENST00000390905 107 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 RNA5SP237-201ENST00000410414 113 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 AL354695.1-201ENST00000427935 228 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 RNU7-48P-201ENST00000458875 63 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 RPS29P1-201ENST00000465274 159 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 MIR3664-201ENST00000579074 99 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 MIR376B-201ENST00000614515 100 ntBASIC1.68□□□□□ -2.14
PTPN22Q9Y2R2 MIR377-201ENST00000362145 69 ntBASIC1.67□□□□□ -2.14
PTPN22Q9Y2R2 Y_RNA.247-201ENST00000364500 92 ntBASIC1.67□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-949P-201ENST00000384040 107 ntBASIC1.67□□□□□ -2.14
PTPN22Q9Y2R2 snoU13.25-201ENST00000458945 104 ntBASIC1.67□□□□□ -2.14
PTPN22Q9Y2R2 MIR2115-201ENST00000516657 100 ntBASIC1.67□□□□□ -2.14
PTPN22Q9Y2R2 RNU6-1163P-201ENST00000364516 107 ntBASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 SNORD38.2-201ENST00000384470 69 ntBASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 RPS29P28-201ENST00000446439 141 ntBASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 AC109327.2-201ENST00000448339 378 ntBASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 AC062037.1-201ENST00000605302 128 ntBASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 AP001362.1-201ENST00000625165 124 ntBASIC1.66□□□□□ -2.14
PTPN22Q9Y2R2 SNORD116-10-201ENST00000363791 102 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 RNY1P2-201ENST00000364820 117 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 Y_RNA.388-201ENST00000383919 113 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 Y_RNA.467-201ENST00000384297 102 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 RN7SKP12-201ENST00000516275 143 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 AP000753.3-201ENST00000604083 169 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.65□□□□□ -2.15
PTPN22Q9Y2R2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 AL161722.3-201ENST00000605789 2983 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 HSBP1P2-201ENST00000299671 229 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-1134P-201ENST00000365156 101 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-1152P-201ENST00000384576 107 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-1237P-201ENST00000384777 107 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 MIR588-201ENST00000384900 83 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 MIR548G-201ENST00000408442 89 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-613P-201ENST00000410412 108 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 MIR151B-201ENST00000584249 96 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 MIR6788-201ENST00000618842 66 ntBASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-1244P-201ENST00000363614 108 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 SNORD58A-201ENST00000383875 65 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 U8.15-201ENST00000390947 134 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 MIR1185-1-201ENST00000408598 86 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 Y_RNA.593-201ENST00000410292 98 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-162P-201ENST00000516228 103 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 RNU6-90P-201ENST00000606352 106 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 AC105081.1-201ENST00000617727 106 ntBASIC1.63□□□□□ -2.15
PTPN22Q9Y2R2 MIR6740-201ENST00000618268 113 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms